Pairwise Alignments

Query, 493 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 79/271 (29%), Positives = 136/271 (50%), Gaps = 27/271 (9%)

Query: 232 RSQEMAQLNGQINRLLEEVAQKQRQVT-----AQQA--AKQEFLLHLSHDLKTPLTTLLG 284
           R+ E+  LN Q+ R +EE +Q + ++      A+QA  +K +FL  +SHDL  PL     
Sbjct: 229 RTAELTSLNDQLLREIEERSQAESRLREAKREAEQANLSKTKFLAAVSHDLLQPLNAARL 288

Query: 285 YLDTWLLSPADARDDSLLQYAAASGQKLQQLLAQMLELAALENGQIKANMRRVSLQSILD 344
           +    L          L++  + S + ++ LL  +++++ L+ G IKA++   +L  ++D
Sbjct: 289 FTSALLERDEPQNAAHLVRNVSNSLEDVENLLGTLVDISKLDAGVIKADVAPFALHELMD 348

Query: 345 ELNQTFTPKAKRAEVSLRLGQGESEGESEFLYTDPQLMSRVLNNLLDNALRHTPPGGEIA 404
            L   +   A+   + L        G S  + +D QL++R+L NLL NA+R+T P G + 
Sbjct: 349 NLAAEYVQVARSEGLELHF-----VGCSAVVRSDIQLLARILRNLLSNAIRYT-PSGRVV 402

Query: 405 VYPQTLASGSYLVIQDSGSGMQPEAIAALQHTPSPSQPELYYCRGETLPQ-----LGVGL 459
           +  + L  G  + + DSG G+  E +  +          L + RG+         LG+GL
Sbjct: 403 LGCRRLRGGVRIEVWDSGIGIAEEHLQDM---------FLEFKRGDVQRPDQDRGLGLGL 453

Query: 460 AIVRQLLARLGCRIEVQSATDRGSRFMIALP 490
           AIV ++   LG RI V+S   +GS F + +P
Sbjct: 454 AIVEKIAGILGHRIRVRSWLGKGSVFAVEVP 484