Pairwise Alignments

Query, 493 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 589 a.a., Two-component hybrid sensor and regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 96.3 bits (238), Expect = 3e-24
 Identities = 79/271 (29%), Positives = 137/271 (50%), Gaps = 24/271 (8%)

Query: 232 RSQEMAQLNGQINRLLEEVAQK-QRQVTAQQAAKQE---FLLHLSHDLKTPLTTLLGY-- 285
           R  E+   + Q+    E +A++ ++Q+ A Q A +E   F    SHDL+ PL  +  +  
Sbjct: 185 RQHELLTASLQMRFEKEALAEQLEQQMAATQRASEEKTRFFAAASHDLRQPLHAIALFGA 244

Query: 286 -LDTWLLS-PADARDDSLLQYAAASGQKLQQLLAQMLELAALENGQIKANMRRVSLQSIL 343
            LD  L   PA      L+    + G  L      ML+++ L+ G I+A+++ V L ++L
Sbjct: 245 VLDKALQGQPAHTHAQRLMGAVHSLGTSLDT----MLDVSRLDAGVIEADVQDVPLNTVL 300

Query: 344 DELNQTFTPKAKRAEVSLRLGQGESEGESEFLYTDPQLMSRVLNNLLDNALRHTPPGGEI 403
             L+ +F  +A+  E+ LRL          ++ TDP L+ R+L NL++NA+++TP GG +
Sbjct: 301 QALHPSFASRAEERELQLRL-----RATPLWVRTDPHLLQRLLGNLIENAIKYTPRGG-V 354

Query: 404 AVYPQTLASGSYLVIQDSGSGMQPE-AIAALQHTPSPSQPELYYCRGETLPQLGVGLAIV 462
            V  +   +  ++ + D+G G+ PE +            P     RG     LG+GL+IV
Sbjct: 355 LVVARPRGAQVWIDVVDTGIGIAPEHSDRVFDEFYQVDNPGRDRTRG-----LGIGLSIV 409

Query: 463 RQLLARLGCRIEVQSATDRGSRFMIALPRYR 493
           R+L   L   + ++S    G+RF + +PR +
Sbjct: 410 RRLSLLLNHPVRLRSWPGHGTRFRVTVPRVK 440