Pairwise Alignments

Query, 493 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 778 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 66/247 (26%), Positives = 128/247 (51%), Gaps = 17/247 (6%)

Query: 250 VAQKQRQVTAQQAAKQEFLLHLSHDLKTPLTTLLGY---LDTWLLSPADARDDSLLQYAA 306
           +A+K+R   A +A K EFL ++SH+L+TPL  +LG+   L   +  P  +   S  +YA 
Sbjct: 533 LAEKERAQAANRA-KSEFLANMSHELRTPLNAILGFSEILQNEMFGPVGSPKYS--EYAR 589

Query: 307 A---SGQKLQQLLAQMLELAALENGQIKANMRRVSLQSILDELNQTFTPKAKRAEVSLRL 363
               SG+ L  ++  +L+++ +E G ++ N   + L  +++E  +    +A++  ++++ 
Sbjct: 590 DIHDSGKHLLNVINDILDMSKIEAGHMRINRETIDLAPLIEETLRLTAIQAEQKNITVQ- 648

Query: 364 GQGESEGESEFLYTDPQLMSRVLNNLLDNALRHTPPGGEIAVYPQTLASGSYLVIQDSGS 423
            Q    G +  +  D + M +++ N+L NA++ T  GG IA+      +   L I D+G 
Sbjct: 649 -QKVCAGLT--MQGDRRAMKQIMLNILSNAVKFTGDGGRIALRTHVHEAAMILTIADTGI 705

Query: 424 GMQPEAIAALQHTPSPSQPELYYCRGETLPQLGVGLAIVRQLLARLGCRIEVQSATDRGS 483
           G+  +A+  +       Q +    +G +    G+GLAI R L+   G  ++++S   RG+
Sbjct: 706 GIPAQALQKIGQPFEQVQSQYAKSQGGS----GLGLAISRSLVKLHGGTMKIRSCEGRGT 761

Query: 484 RFMIALP 490
              I +P
Sbjct: 762 VVTIIIP 768