Pairwise Alignments

Query, 409 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

Subject, 416 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

 Score =  114 bits (285), Expect = 5e-30
 Identities = 115/430 (26%), Positives = 184/430 (42%), Gaps = 42/430 (9%)

Query: 6   NKTRFLQLSPLMRAMGFGVLISMTAVGGVALGAEGHEHKAESAKGQVSQEQAHDKEREQG 65
           NK +       + A+GFG L    + G  A  A   EH A    G   +++A    +E+G
Sbjct: 3   NKRKIALAVAAVAALGFGSLAWNNSSGQQA--ASTAEHGANDGHGD--EKKAASAAKEEG 58

Query: 66  DEAALGGEEAHG-------GELVLSEEQRQLAGIRVEQVSSQGFSLAAVATATLVVDRER 118
           DE    GEE H        G+L LS EQ + AG+ +E  + +           +  D +R
Sbjct: 59  DEGH--GEEGHSEEGGEEEGKLTLSAEQIKAAGVALEAAAPRDLGTVVSFPGEIRFDEDR 116

Query: 119 TVTLVPQLDVRVLARHVVPGQEVAKGQPLLTLGGAAVAQ-------AQADYINAAAEWSR 171
           T  +VP++   V A     G+ V KGQ L  +    ++        AQ     A   + R
Sbjct: 117 TAHVVPRVPGVVEAVQANLGETVKKGQVLAVIASQQISDLRSEQQAAQRRVELARVTFER 176

Query: 172 VKRMSQSAVSAS----RRLQAQVDAELKRAILGALKMTPAQIKALESDPETIGS--YQLL 225
            K++ Q  +SA     +  QA  +AE+      +L     ++ A+ +   ++G   Y+L 
Sbjct: 177 EKQLWQDKISAEQDYLQARQALQEAEI------SLANAKQKVGAIGASVNSVGGNRYELR 230

Query: 226 APLDGRVQQDVAMKGQVFSGGTALMQLTDESHLWVEAQVTPTQSQQIKVGSKALVKVGDF 285
           AP D  V +     G+V S  T    L+D + +W    V PT   ++  G    VKV   
Sbjct: 231 APFDAVVVEKHLTVGEVVSEATNAFILSDLNQVWATFAVPPTDLGKVTTG--RAVKVSSP 288

Query: 286 SLEAEVIGRSHEIDSV----TRTEQILVAFANPGHVLHAGQFAEIYL-ADNNQDGVILPD 340
            +  EV G+   + S+     R   + V   NP      G F  I + +  ++  V +P+
Sbjct: 289 DMNVEVEGKVGYVGSLLGEQNRAATVRVTLTNPNGAWRPGLFVNIAVTSQTDRVAVAVPE 348

Query: 341 AALTRGGDGDWQVFVEEGDGFEAVEVEVSERQRG-MNLVQGLSPKMRVVVSGAFFLASEQ 399
            A+    D    VFV   DGF+   V++  R  G + ++ G+    +V  SG+F L SE 
Sbjct: 349 HAVQTVEDKP-SVFVRTPDGFDTRPVKLGRRDNGYVEIIDGIEAGAQVATSGSFTLKSEL 407

Query: 400 AKSGFDIHNH 409
            K+  + H H
Sbjct: 408 GKASAE-HGH 416