Pairwise Alignments

Query, 308 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella loihica PV-4

Subject, 295 a.a., RarD protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  168 bits (425), Expect = 2e-46
 Identities = 95/283 (33%), Positives = 156/283 (55%), Gaps = 7/283 (2%)

Query: 10  KGNALAIVSFLLWGLLPLYYQFLPGADITEMLAIRLLCSVPFMLLVFLLLGKPLPSLALL 69
           +G  L + ++++WGL P+Y++ +      E++  R L S  F  +V +    P      L
Sbjct: 8   RGYILGLSAYIIWGLFPIYFKAIAAVPAIEIIIHRALWSALFGSIVLMFWKHP-GWWRDL 66

Query: 70  RTNLPSVALCALASLIMCVSWYSFTWALTHGQVLAASLGFFINPLFAIGLGVLFLKDRLT 129
           R N   +A+ AL+  ++  +W  + WA+ +G++L ASLG++INPL  + LG+L L +RL 
Sbjct: 67  RNNPQRLAVLALSGTLIASNWIIYVWAVNNGRMLEASLGYYINPLVNVLLGMLLLGERLR 126

Query: 130 VAQKWAVLLGTLGIGYMVMAYAQLPWLALLMGSFFALYGLCKKFIRFDSLTSVTIEAALL 189
             Q  AV    +G+ + V     LPW++L +   FA YGL +K     +L  + +E  +L
Sbjct: 127 RLQMLAVAFAAIGVAHQVWHVGSLPWVSLALPLTFAFYGLIRKQAPVAALPGLVVETWML 186

Query: 190 TPIAAGYLFWL--SATGQSEALSSGTGTMLLYMGSA-PVTLLPLIFFALAIRHTSLSMVG 246
            P+A   L WL  + T  S      T T  +++ +A PVTL+PL+ F  A RH   + +G
Sbjct: 187 VPLA---LIWLAINPTAVSVQPEFWTTTQAIWLAAAGPVTLVPLVCFNAAARHLPFTTLG 243

Query: 247 LLQYIEPTMHFLLAIFLFNETFDSVKAVSFALIWVGLLLCSLE 289
            LQY+ PT+  LLA+ L+ E   +   ++FA IW GL + S++
Sbjct: 244 FLQYVAPTLVLLLAVLLYGEHLTTSTLITFAFIWAGLAIYSVD 286