Pairwise Alignments

Query, 308 a.a., transporter DMT superfamily protein (RefSeq) from Shewanella loihica PV-4

Subject, 309 a.a., Protein RarD from Pseudomonas sp. RS175

 Score =  167 bits (424), Expect = 2e-46
 Identities = 95/299 (31%), Positives = 166/299 (55%), Gaps = 14/299 (4%)

Query: 8   SAKGNALAIVSFLLWGLLPLYYQFLPGADITEMLAIRLLCSVPFMLLVFLLLGKPLPSLA 67
           S +G A  + + LLWG  PL+Y+ L G D   +L+ R++ +  F++ + L+  +     +
Sbjct: 7   SGQGVAFGLGATLLWGSYPLWYKPLAGLDAYHLLSWRVVFAELFLVALVLVTARVATLRS 66

Query: 68  LLRTNLPSVALCALASLIMCVSWYSFTWALTHGQVLAASLGFFINPLFAIGLGVLFLKDR 127
            L+T  P+  L    S ++ + W  + + +  G+VL  + G+F++P+ ++ +  L  K+R
Sbjct: 67  TLKTVRPTNVLTV--SAVLGLWWLMYIYGIMTGRVLEVAFGYFLSPIMSMVVSRLIFKER 124

Query: 128 LTVAQKWAVLLGTLGIGYMVMAYAQL---PWLALLMGSFFALYGLCKKFIRFDSLTSVTI 184
           LT  Q WA+ L   G+  M      L   PW+AL++G  ++ YG+ KK +  D +   T+
Sbjct: 125 LTTLQTWAIFLAVTGVTLMAFELLNLHSFPWIALVIGFCYSFYGIFKKKVPGDPVVIQTL 184

Query: 185 EAALLTPIAAGYLFWLSATGQS-EALSSGTGTMLLYMGSAPVTLLPLIFFALAIRHTSLS 243
           E A+L P AA +L W  A G   + L SGT  +LL + +  +T+LPL +++LA +  S+ 
Sbjct: 185 EIAVLLPFAAVFLLWAQAQGMGHQFLQSGTRDLLL-VATGLITVLPLWWYSLAAKQLSMI 243

Query: 244 MVGLLQYIEPTMHFLLAIFLFNETFDSVKAVSFALIWVGLLLCSLEALHGLWRSLTTRR 302
            +G LQ++ P  +FLLA F++ E   S+K  +F+ IW+ L L +       W S+  +R
Sbjct: 244 TLGFLQFVPPICNFLLAAFVYGEPVSSLKLAAFSFIWLALALFT-------WNSIRVQR 295