Pairwise Alignments

Query, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 249 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Ralstonia solanacearum UW163

 Score =  261 bits (668), Expect = 7e-75
 Identities = 136/245 (55%), Positives = 174/245 (71%), Gaps = 3/245 (1%)

Query: 1   MKKQDFTFGIHAVEALLKNSPERVIEMWVLQGRDDQRLMPLIAMAAEYGVSVQQASRKAL 60
           M K     G HAV A L++  + + E++    R D+R+   +  A   GV +  A  + L
Sbjct: 1   MSKSKLLIGFHAVTARLRHDAQSIDEIYFEANRRDRRMQDFLKAAEAAGVRLIPADNERL 60

Query: 61  DDKAGSSQHQGVLVRAKPAK-QLNDNDLLALLDKTETPFLLILDGVTDPHNLGACLRNAD 119
              AG+ +HQGV+ +A+     LN ++LL  +D    P LL+LDGVTDPHNLGACLR AD
Sbjct: 61  RGIAGTDRHQGVVAKAEALSLALNLDELLDGIDGP--PLLLVLDGVTDPHNLGACLRVAD 118

Query: 120 AAGVHGVIVPRDNSVGLTPTVSKVACGAAEVVPLFQVTNLARTMKALQEKGVWIVGAAGE 179
           AAG H VI P+D SVG+  TV+KVA GAAE VP   VTNLART++ LQ++GVW++G A E
Sbjct: 119 AAGAHAVIAPKDRSVGINATVAKVASGAAETVPYITVTNLARTLRELQQRGVWVIGTADE 178

Query: 180 AEHDLYKADLKGPIAIAMGAEDKGLRRLTRESCDSLASIPMAGSVSSLNVSVATGICLFE 239
           AE +LY+AD KGPIA+ MGAE +G+RRLTRE+CD+L SIPMAGSV SLNVSVA+G+CLFE
Sbjct: 179 AEQNLYQADFKGPIALVMGAEGEGMRRLTRETCDTLVSIPMAGSVESLNVSVASGVCLFE 238

Query: 240 AVRQR 244
           AVRQR
Sbjct: 239 AVRQR 243