Pairwise Alignments

Query, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

Subject, 243 a.a., '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  310 bits (794), Expect = 2e-89
 Identities = 152/240 (63%), Positives = 190/240 (79%)

Query: 5   DFTFGIHAVEALLKNSPERVIEMWVLQGRDDQRLMPLIAMAAEYGVSVQQASRKALDDKA 64
           +  +GIHAV+ALL+ +PER  E+++L+GR+D+RL+PLI      GV +Q A+R+ LD+K+
Sbjct: 3   EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62

Query: 65  GSSQHQGVLVRAKPAKQLNDNDLLALLDKTETPFLLILDGVTDPHNLGACLRNADAAGVH 124
             + HQG++ R KP +Q  +NDL  L+   + PFLLILDGVTDPHNLGACLR+ADAAGVH
Sbjct: 63  DGAVHQGIIARVKPGRQYQENDLPDLIALHDRPFLLILDGVTDPHNLGACLRSADAAGVH 122

Query: 125 GVIVPRDNSVGLTPTVSKVACGAAEVVPLFQVTNLARTMKALQEKGVWIVGAAGEAEHDL 184
            VIVP+D S  L  T  KVACGAAE VPL +VTNLARTM+ LQE+ +WIVG AGEA+H L
Sbjct: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182

Query: 185 YKADLKGPIAIAMGAEDKGLRRLTRESCDSLASIPMAGSVSSLNVSVATGICLFEAVRQR 244
           Y++ + G +A+ MGAE +G+RRLTRE CD L SIPMAGSVSSLNVSVATGICLFEAVRQR
Sbjct: 183 YQSKMPGRMALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242