Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 474 a.a., Replicative DNA helicase (EC 3.6.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  297 bits (761), Expect = 4e-85
 Identities = 170/461 (36%), Positives = 280/461 (60%), Gaps = 13/461 (2%)

Query: 12  KPRDIQID----ALKMPPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFT 67
           +P D   D     L++PPHSIE+E +VLG L+L++ AWD+VA+ + + DFY   H+++F 
Sbjct: 5   EPEDFMADPEAATLRVPPHSIESETAVLGALLLNNAAWDRVADLLAEADFYRSEHRVLFG 64

Query: 68  AMEALVAAGQPIDLITVSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERA 127
           A+ AL+ A +P D++TV E+L  +   EDAGG  YL  +A+  PSA N+  YA IVRE++
Sbjct: 65  AIAALINASKPADVVTVFERLRDQGKAEDAGGLGYLNGLAQYLPSAANVRRYAEIVREKS 124

Query: 128 VVREMIKVANEIADAGFNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTV 187
           V+R+++  ++E+A A FNP  R ++E+LD A+ ++  + +Q A  ++  EG +  +   +
Sbjct: 125 VLRQLVAASDELAAAAFNPGDRTAAEVLDQAQQQIIALGDQGAPRDDW-EGTEDGMVALL 183

Query: 188 DKIEELYNNPHNGVTGVSSGFNDLDR-MTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAA 246
            +IE+       G T V +G  +LD  +  G + G LI +  RPSMGKT  AM++    A
Sbjct: 184 GRIEDQAQGT-GGQTFVPTGLAELDELLNGGLREGHLIALGGRPSMGKTALAMSIGNTFA 242

Query: 247 LHEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQ-LDDDDWARVSSTMGIMLEQG 305
                 V + S+EMP  ++  R ++ + ++  ++++ G+ L D DW R++      L + 
Sbjct: 243 -EAGHAVGMLSMEMPRTEVHERRMSMVSQIHLSRVQRGERLRDFDWPRITEATE-RLRRT 300

Query: 306 KMYIDDGSGLTPTEVRSRARRIAREYGGLSMIMIDYLQLMQVPALSDNRTLEIAEISRSL 365
             Y  D  GL   +VR++AR + R + GL ++++DYL LM       +R  ++ EI++ L
Sbjct: 301 PFYTSDQVGLNINQVRAKARALKRRH-GLRLLIVDYLGLMAGTDSKMSRAYQLDEITKGL 359

Query: 366 KALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRD--EVYND 423
           K LAKEL I V+ L+Q++R +EQR D+RP+ SD R+SGS+EQDAD+ +F+YR+       
Sbjct: 360 KGLAKELGITVLMLAQIDRKVEQRTDQRPLMSDFRDSGSVEQDADVCIFVYRECRAKPGL 419

Query: 424 DSEDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQ 464
            +E    AE+I+ KQR G  G+V + + G+ + F ++   Q
Sbjct: 420 PTEWDYIAELIVAKQRGGAAGKVEVMYVGENTLFKDWPEDQ 460