Pairwise Alignments

Query, 468 a.a., replicative DNA helicase (RefSeq) from Shewanella loihica PV-4

Subject, 481 a.a., Replicative DNA helicase (EC 3.6.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  470 bits (1209), Expect = e-137
 Identities = 239/451 (52%), Positives = 331/451 (73%), Gaps = 5/451 (1%)

Query: 15  DIQIDALKMPPHSIEAEQSVLGGLMLDSDAWDKVAEAVVKDDFYSRSHKMIFTAMEALVA 74
           D QI  L++PPHSIEAE SVLGGL+LD+ AWD+VA+ +   DFY   H++ ++A+  LV 
Sbjct: 24  DHQIAQLRVPPHSIEAESSVLGGLLLDNGAWDRVADLINDSDFYRYEHRLAYSAIATLVN 83

Query: 75  AGQPIDLITVSEQLELEDNLEDAGGFAYLGEIAKNTPSAGNILSYAAIVRERAVVREMIK 134
           A +P D++TV E L+     E+AGG  YL  +A+  PSA NI  YA IVRERA++R+++ 
Sbjct: 84  ASKPADVVTVFEHLQSFGKAEEAGGLGYLNSLAQYVPSAANIRRYAEIVRERAILRKLVA 143

Query: 135 VANEIADAGFNPEGRNSSELLDLAESKVFKIAEQRANANEGPEGIKTILEKTVDKIEELY 194
            ++EIA A FNP+GR  +++LD AE KVFKI E+ +   EG + +  ++   +D+++E+ 
Sbjct: 144 ASDEIATAAFNPQGRPVAKILDEAEQKVFKIGEEGSRMKEGFQSMDKLVVDLLDRVQEMA 203

Query: 195 NNPHNGVTGVSSGFNDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAALHEDKPVL 254
           +NP + VTGV +GF DLDRMT+G Q+GDL+++AARPSMGKT FA+N+ E  AL+E  PV 
Sbjct: 204 DNPAD-VTGVPTGFIDLDRMTSGLQAGDLVVLAARPSMGKTAFAINIAEHVALNEGLPVA 262

Query: 255 IFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGIMLEQGKMYIDDGSG 314
           +FS+EM + Q+ +R++ S+GR++Q  +RTG+L DD+W R++  +   L    ++ID+  G
Sbjct: 263 VFSMEMGASQLAVRVVGSIGRINQGHLRTGKLTDDEWPRLTEAIE-KLRTVSLHIDETPG 321

Query: 315 LTPTEVRSRARRIAREYGGLSMIMIDYLQLM--QVPALSDNRTLEIAEISRSLKALAKEL 372
           LTP+E+R+ ARR+AR+ G L +I++DYLQLM     A  DNR  E+ EISR LK LAKEL
Sbjct: 322 LTPSELRANARRLARQCGKLGLIVVDYLQLMSGSSAAGGDNRATELGEISRGLKMLAKEL 381

Query: 373 EIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDDS-EDKGTA 431
           + PVIALSQLNRS+EQR DKRP+ SDLRESG+IEQDAD+IMFIYRDE Y  D+ ++ G A
Sbjct: 382 QCPVIALSQLNRSVEQRTDKRPMMSDLRESGAIEQDADIIMFIYRDEYYTRDACKEPGVA 441

Query: 432 EIIIGKQRNGPIGRVRLTFQGQFSRFDNYAG 462
           EIIIGKQRNGP G V+L F    +RF++ AG
Sbjct: 442 EIIIGKQRNGPTGTVKLAFLNMLTRFESLAG 472