Pairwise Alignments

Query, 825 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 1358 a.a., Sensory box/GGDEF family protein from Pseudomonas sp. S08-1

 Score =  315 bits (807), Expect = 1e-89
 Identities = 177/425 (41%), Positives = 247/425 (58%), Gaps = 4/425 (0%)

Query: 375  LERLAMLDTLTGLPNKAMLHHELQTAIACIASEEDCVVLMFLDLDEFKRINDTLGHIQGD 434
            + RLA  D LT LPN+ +    L TA+      ++ VVLMFLDLD FK IND+LGH  GD
Sbjct: 919  IHRLAYYDALTLLPNRTLFQDRLHTALQHAERHDEWVVLMFLDLDRFKPINDSLGHAAGD 978

Query: 435  ELLKIVAARLTNSVREMDTVFRQGGDEFLILLRQVRDEQEVSN----VIHRIFSALQHPV 490
             +LK VA RL   V E DTV R GGDEF +LL+         N    V  +I ++L  P 
Sbjct: 979  RMLKDVAVRLAACVAEDDTVARMGGDEFTLLLQARNTRAGALNRAIHVAEQILASLAQPF 1038

Query: 491  VLGSHKLIVTTSIGLAYCNTSQLRAEELIQHADLAMYQAKSAGRSNYRVFSEEMLHQANN 550
            VL   +  VT SIG+A          +L+++AD AMY AK  G++N++ +  EM   A  
Sbjct: 1039 VLQGREFFVTASIGIALAPQDGDELSQLMKNADTAMYHAKERGKNNFQFYQAEMNATALQ 1098

Query: 551  RLMIEQSIGAAINEEQLVLFLQPIVELPSGRLRGFEALIRWFHPERGLIMPGDFIPDIEH 610
            RL +E  +  A+ + Q +L+ QP +     RL G EAL+RW HP RGL+ P +FIP +E 
Sbjct: 1099 RLELESDLRHALEQNQFLLYYQPQLSSDGKRLTGVEALLRWQHPRRGLVAPNEFIPVLEE 1158

Query: 611  SEAIIEVGNYVIRKASELVAQLKSAGWPELYIAVNLSAKHFLAPDLLNVVRQEVEAQQIS 670
               I +VG++V+ +A   +     A      ++VNLSA+ F    L   + + + A  + 
Sbjct: 1159 LGLIAQVGDWVLAQACRQLKAWHEAKVRVPKVSVNLSARQFADGQLGMRISRILGASGLP 1218

Query: 671  AQSLLLEVTEESVIEQVEQAMAAMAALKALGVRIAIDDFGTGYSSLSYLKQLPFDLLKID 730
               L LE+TE  ++  V + M  +A+LK LG+ IA+DDFGTGYSSL+YLKQ P D+LKID
Sbjct: 1219 PACLELELTESILMNDVGETMQVLASLKKLGLCIAVDDFGTGYSSLNYLKQFPIDVLKID 1278

Query: 731  RCFTANVLDGEADAHIITTVIELAHNLGRQVVAEGIETQQQAECLSCQRCELGQGYYFSR 790
            R F   + +GE D  I   +I +AH+LG  V+AEG+ETQ+Q + L    C+  QGY F +
Sbjct: 1279 RSFVDGLPEGEQDGQIARAIIAMAHSLGLAVIAEGVETQEQLDFLRDHDCDEVQGYLFGK 1338

Query: 791  PLDVA 795
            P+  A
Sbjct: 1339 PMAAA 1343