Pairwise Alignments

Query, 825 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 1055 a.a., Phytochrome-like protein / Cph2 from Pseudomonas sp. S08-1

 Score =  306 bits (785), Expect = 3e-87
 Identities = 171/452 (37%), Positives = 262/452 (57%), Gaps = 3/452 (0%)

Query: 355 RQLADNMQGMENEVDE---YTHELERLAMLDTLTGLPNKAMLHHELQTAIACIASEEDCV 411
           R +  +  G++N++ E   +  EL   A  D LTGLPN+A+L   L+         +  +
Sbjct: 462 RGVITHFVGVQNDISEQKRFEDELSFNASHDVLTGLPNRALLEDRLRQGCKISQRYQRSL 521

Query: 412 VLMFLDLDEFKRINDTLGHIQGDELLKIVAARLTNSVREMDTVFRQGGDEFLILLRQVRD 471
            +MF+DLD FK IND++GH  GD LL  VA R+   VR  DTV R GGDEF++LL  +  
Sbjct: 522 SVMFIDLDGFKPINDSIGHNFGDLLLIEVAKRMCEQVRPGDTVARMGGDEFIVLLPDLAM 581

Query: 472 EQEVSNVIHRIFSALQHPVVLGSHKLIVTTSIGLAYCNTSQLRAEELIQHADLAMYQAKS 531
           E++V  V  R+ +++  P  +    L VT SIG+   + +  +  +LIQ ADLAMY+AK 
Sbjct: 582 EEDVIPVAERLIASISKPYRIQGIDLHVTASIGITLSDGALEQPMQLIQQADLAMYKAKQ 641

Query: 532 AGRSNYRVFSEEMLHQANNRLMIEQSIGAAINEEQLVLFLQPIVELPSGRLRGFEALIRW 591
            GR+NY+ ++ ++  + + R+ +   +  AI  E   L+ QP ++  SGR+ G EAL+RW
Sbjct: 642 EGRNNYQWYTNDLNLRVSERVNLRNELQKAIESEGFELYYQPQIDGRSGRVVGLEALLRW 701

Query: 592 FHPERGLIMPGDFIPDIEHSEAIIEVGNYVIRKASELVAQLKSAGWPELYIAVNLSAKHF 651
            HP +G + P  F+P  E +  II +  +V+  A   +  L   G     +AVN+S   F
Sbjct: 702 QHPTQGFVSPAVFVPVAEDTGQIIPLSIWVLDTACRQIRLLSEQGMKGPSVAVNISPVQF 761

Query: 652 LAPDLLNVVRQEVEAQQISAQSLLLEVTEESVIEQVEQAMAAMAALKALGVRIAIDDFGT 711
              + +  V+  +    + A  L LE+TE  ++   ++A+  +  LKALGVRIAIDDFGT
Sbjct: 762 QRSNFVESVQAMLHKHDLGADMLELEITETVLLNNADKAIETLHRLKALGVRIAIDDFGT 821

Query: 712 GYSSLSYLKQLPFDLLKIDRCFTANVLDGEADAHIITTVIELAHNLGRQVVAEGIETQQQ 771
           G+SSL+YLK+LP D +KIDR F   ++    DA I   +I +AH+L  +V+AEG+ET+ Q
Sbjct: 822 GFSSLNYLKRLPIDKVKIDRSFVQEIISDRHDAAITQGIISMAHHLRLKVIAEGVETEPQ 881

Query: 772 AECLSCQRCELGQGYYFSRPLDVASVFKVLQE 803
              L    C+  QGYYF++P+  + V   L++
Sbjct: 882 LAFLKKSHCDEFQGYYFAKPMPSSEVEDYLRQ 913