Pairwise Alignments

Query, 243 a.a., quinol dehydrogenase periplasmic component (RefSeq) from Shewanella loihica PV-4

Subject, 164 a.a., Ferredoxin-type protein NapF from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 67.8 bits (164), Expect = 1e-16
 Identities = 48/164 (29%), Positives = 67/164 (40%), Gaps = 21/164 (12%)

Query: 51  IRPPGALDEQDFLSACVRCGLCVQACPYDTLKLARWFEGAPTGTPYFTARTVPCEMCEDI 110
           IRPP + DE  FL+ C RC  C+ AC  + L+      GA  G P    +   C  C D 
Sbjct: 22  IRPPWSGDESHFLTHCTRCDACINACENNILQ-----RGA-GGYPSVNFKNNECSFCYD- 74

Query: 111 PCVKACPSGSLDHALTNIDEAKMGIAVLIDEKNCLNFKGLRCDVCYRICPLIDNAITLER 170
            C +ACP        T   + +  I        CL ++ + C  C   C  +  AI    
Sbjct: 75  -CAQACPESLFSPRHTRAWDLQFTIG-----DACLAYQSVECRRCQDSCEPM--AIIF-- 124

Query: 171 QHNQRSDHHAMFLPTVNSDTCTGCGKCEHACVLEEAAIKVLPAH 214
               R     ++ P +NS  C GCG C  +C +     + L AH
Sbjct: 125 ----RPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEYLHAH 164