Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 318 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Kangiella aquimarina DSM 16071

 Score =  132 bits (333), Expect = 9e-36
 Identities = 78/279 (27%), Positives = 142/279 (50%), Gaps = 1/279 (0%)

Query: 52  FNLQFIAGEEGSIMSDIGMEIHARAKLDTLEKADIIIVPYWRTVDERP-NDQLIEALRLA 110
           ++++ +  +E  ++S+ G +I     +D L+    +++P  +           +  LR  
Sbjct: 37  YSVEVVGFDEQLVVSEAGTQIQPNTTIDALQDCHTLVIPGGKGARHNLLTADSVAKLRQL 96

Query: 111 HERGTLIVGLCLGGYVLAFAGLLDGKRAATHWELEQDFTQRFPETLLDTNALYVEDGGVI 170
             R   +V +C G ++LA  GL  G + ATHW   ++  +RFPE  +D  +LYVEDG   
Sbjct: 97  MARCQRVVSICTGAFLLAETGLPKGTQVATHWAFVEELAKRFPELQVDKKSLYVEDGKYW 156

Query: 171 TSAGTAAGIDCCLFVFRKYYSSAIANRIARRMVVPPYRDGGQAQFIEQPIPITTSDLRIN 230
           +SAG  A ID  L +         A  +A+ MVV   R G Q Q+ +     T SD R+ 
Sbjct: 157 SSAGVTACIDLTLRLIELDLGIKAAMHVAQHMVVYLKRTGSQQQYSDFLSLQTPSDERLI 216

Query: 231 ELMERIRNDIGHKYTLDELAESVMMTRRTFTRKFHKATGMAFGEWLASERLNLAQELLES 290
            ++  +++++  + T++ +A+   M+ R   R F K  G     +L   R++LA+ LL S
Sbjct: 217 SIVNWLKHNLDKQITVEMIADKAHMSERQLHRSFVKEVGKPPAHYLEELRMDLARTLLVS 276

Query: 291 TDLTIEQIVTKTGFSSVFIFRDKFKGRYAVTPNRWRKTF 329
           +D  +++I    G+ S   F+  F+  ++++P R+R+ F
Sbjct: 277 SDENLKKIALSVGYRSYDGFKRAFERNFSISPLRYRQAF 315