Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 317 a.a., AraC family transcriptional regulator from Escherichia coli ECRC98

 Score =  330 bits (845), Expect = 4e-95
 Identities = 161/308 (52%), Positives = 213/308 (69%)

Query: 22  VSVIVFNGFSPFHISVPSIVFGRDTLNEAFFNLQFIAGEEGSIMSDIGMEIHARAKLDTL 81
           V++I   GFSPFH+SVP IVF      +  F++   A + G++ S  G  + A      +
Sbjct: 6   VAIIAVAGFSPFHLSVPFIVFSEKMAEKKRFHVIICAEKPGNVDSADGFSVTATHDYTAV 65

Query: 82  EKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGLLDGKRAATH 141
            +ADI+I+PYW T+ ++P  +L+EAL  A + G  IVGLCLG +VL +AGLL  KRAATH
Sbjct: 66  IQADIVIIPYWGTITQKPPQKLLEALTTARDNGAQIVGLCLGTFVLGYAGLLKNKRAATH 125

Query: 142 WELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSSAIANRIARR 201
           WE E++F  RFP+T LD NALYV+D G+ITSAGTAA +DCCL++ R+++ S  AN IARR
Sbjct: 126 WEFEREFQARFPQTHLDINALYVDDDGIITSAGTAAALDCCLYIVRQHFGSDYANHIARR 185

Query: 202 MVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELAESVMMTRRTFT 261
           MVVPPYR GGQAQFIEQP+P  T D RIN L++ +R +I  ++ LD LA+ VMM+RRT T
Sbjct: 186 MVVPPYRTGGQAQFIEQPVPKNTHDERINLLLDYLRQNIAQQHDLDSLAQRVMMSRRTLT 245

Query: 262 RKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIFRDKFKGRYAVT 321
           R F KATG +  EWL +ERL  +QELL S+ L +E+I  + GF S   +R  FK  + V+
Sbjct: 246 RHFMKATGSSIAEWLITERLRRSQELLGSSQLPVERIAAEVGFLSPVTWRQHFKSHFGVS 305

Query: 322 PNRWRKTF 329
           P  WRKTF
Sbjct: 306 PAEWRKTF 313