Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 323 a.a., transcriptional regulator FtrA from Escherichia coli ECRC98

 Score =  221 bits (562), Expect = 3e-62
 Identities = 113/310 (36%), Positives = 179/310 (57%), Gaps = 2/310 (0%)

Query: 20  PNVSVIVFNGFSPFHISVPSIVFG--RDTLNEAFFNLQFIAGEEGSIMSDIGMEIHARAK 77
           P V  + ++G   F   V   +FG  R  L + ++     A E G++ +  G+ + A   
Sbjct: 7   PLVIALAYDGLCTFEFGVAVEIFGLPRPELGDNWYRFAVAAVEPGALQATGGIHVVADGG 66

Query: 78  LDTLEKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGLLDGKR 137
           L+ L  AD+II+P WR +D +  + L ++LR AH+RGT +V +C G +VLA AGLL  ++
Sbjct: 67  LELLPNADMIIIPGWRGIDAKVPEMLCQSLREAHQRGTRLVSICSGVFVLAAAGLLHQRK 126

Query: 138 AATHWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSSAIANR 197
           A THW   +    R+P   +  N LY ++G V+TSAG+AAGID CL + RK +   IAN 
Sbjct: 127 ATTHWRYTEQLQHRYPSISVSDNVLYQDEGQVMTSAGSAAGIDLCLHIVRKDFGHEIANN 186

Query: 198 IARRMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELAESVMMTR 257
           +ARR+V+ P+R G Q Q + +P+        +  L + ++ ++   +T+  LAE V M+ 
Sbjct: 187 VARRLVIQPHRQGDQPQNLTRPMASPRESQTLGALFDFLQQNLAQTHTVSSLAERVNMSP 246

Query: 258 RTFTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIFRDKFKGR 317
           RTF R+F   TGM    WL +ERL   Q+ L+++   IE+I   TGF +  + R  F  R
Sbjct: 247 RTFLRRFEALTGMTPARWLLNERLIRVQDYLQNSVFNIEKIAELTGFGNSALLRHHFHQR 306

Query: 318 YAVTPNRWRK 327
           + ++P+++RK
Sbjct: 307 FLLSPSQYRK 316