Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 330 a.a., transcriptional regulator FtrA from Escherichia coli ECOR38

 Score =  218 bits (554), Expect = 2e-61
 Identities = 115/322 (35%), Positives = 184/322 (57%), Gaps = 2/322 (0%)

Query: 8   PKTQSTEAMQHVPNVSVIVFNGFSPFHISVPSIVFG--RDTLNEAFFNLQFIAGEEGSIM 65
           P+ +    +   P V V+ ++G   F   V   +FG  R  + + ++     A E G++ 
Sbjct: 2   PEKRKMMTISQRPLVVVLAYDGLCTFEFGVAVEIFGLPRPEMGDNWYRFAVAAVEAGALQ 61

Query: 66  SDIGMEIHARAKLDTLEKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGY 125
           +  G+ + A   L+ L  AD+II+P WR VDE   + L EALR  H+RGT +V +C G +
Sbjct: 62  ATGGIRVVADGGLELLTDADMIIIPGWRGVDEPVPEMLCEALRETHQRGTRLVSICSGVF 121

Query: 126 VLAFAGLLDGKRAATHWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFV 185
           VLA AGLL  ++A THW   +    R+P   +  N LY ++G V+TSAG+AAGID CL +
Sbjct: 122 VLAAAGLLHQRKATTHWRYTEQLQHRYPSIHVCDNVLYQDEGQVMTSAGSAAGIDLCLHI 181

Query: 186 FRKYYSSAIANRIARRMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYT 245
            RK Y   IAN +A+R+V+ P+R G Q Q + +P+  +        L + ++ ++   +T
Sbjct: 182 VRKDYGHEIANNVAQRLVIQPHRHGEQPQNMTRPMASSRESQTFGALFDFLQQNLAQTHT 241

Query: 246 LDELAESVMMTRRTFTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFS 305
           +  LA  V M++RTF R+F   TGM    WL +ERL   Q+ L+++  +I++I   TGF 
Sbjct: 242 VASLAGRVNMSQRTFLRRFAALTGMTPARWLLNERLIRVQDYLQNSAFSIDKIAELTGFG 301

Query: 306 SVFIFRDKFKGRYAVTPNRWRK 327
           +  + R  F  R+ ++P+++RK
Sbjct: 302 NSALLRHHFLQRFLLSPSQYRK 323