Pairwise Alignments

Query, 333 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 325 a.a., helix-turn-helix domain-containing protein from Dickeya dadantii 3937

 Score =  364 bits (935), Expect = e-105
 Identities = 174/312 (55%), Positives = 229/312 (73%)

Query: 18  HVPNVSVIVFNGFSPFHISVPSIVFGRDTLNEAFFNLQFIAGEEGSIMSDIGMEIHARAK 77
           H+P+V+V+  N FSPFH+SVP ++FG     +  F L+  AGEEG + S  G+ +     
Sbjct: 4   HIPSVAVVACNQFSPFHLSVPCMIFGDVLPGQPLFRLRICAGEEGVLRSTQGLLVDTPFG 63

Query: 78  LDTLEKADIIIVPYWRTVDERPNDQLIEALRLAHERGTLIVGLCLGGYVLAFAGLLDGKR 137
           LD L +ADI++VPYWR   E PN  L+ AL  A+ RG+L+VGLCLG YVLA+AGLL  ++
Sbjct: 64  LDALAEADIVVVPYWRNPQETPNPALLAALAAAYARGSLLVGLCLGTYVLAWAGLLTQRK 123

Query: 138 AATHWELEQDFTQRFPETLLDTNALYVEDGGVITSAGTAAGIDCCLFVFRKYYSSAIANR 197
           AATHWE  QDF QRFP+  LDT+ALYVED  +ITSAGTAAG+DCCL + RKY+ SAIAN 
Sbjct: 124 AATHWEFAQDFQQRFPDIHLDTHALYVEDERLITSAGTAAGLDCCLHLVRKYHGSAIANN 183

Query: 198 IARRMVVPPYRDGGQAQFIEQPIPITTSDLRINELMERIRNDIGHKYTLDELAESVMMTR 257
           +ARR+V+PP+R+GGQAQFIE+P+P +T D RIN L++ +RN +   + LDELA   +M+R
Sbjct: 184 VARRIVIPPHREGGQAQFIERPVPASTQDARINALLDYLRNRLDQSHHLDELARRTLMSR 243

Query: 258 RTFTRKFHKATGMAFGEWLASERLNLAQELLESTDLTIEQIVTKTGFSSVFIFRDKFKGR 317
           RTFTR+FHKATGM+ GEWL +ERL  +Q LLEST L+I+ I  + GFS+    R  F+ +
Sbjct: 244 RTFTRQFHKATGMSVGEWLMAERLQQSQTLLESTTLSIDAIAEQVGFSTATSLRQHFRRQ 303

Query: 318 YAVTPNRWRKTF 329
           + VTP  WR+TF
Sbjct: 304 FNVTPGEWRRTF 315