Pairwise Alignments

Query, 258 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 241 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 50.4 bits (119), Expect = 3e-11
 Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 24/218 (11%)

Query: 45  LTGALISALGISISLFAKFQVMGLEAFNQRPDLLGNYVDSPLAYIFNMGLILAG-SCILL 103
           L G LI  +  S+  F+ +   G   +N     LG Y  S LA +FN GL     S +L 
Sbjct: 29  LVGHLIGLVAASLG-FSDYSGQGFSFYNFSLSELGQYGHSELAVVFNGGLFFGSLSLVLF 87

Query: 104 AMYGLLQLKLGHFGNYI--AFAGFVVG-VTIILIGIYPINYLKEHRLFSTIFL------I 154
           A++ L        G ++  +F+  V   + +  +G++P+N    H L    F       +
Sbjct: 88  ALFALQNSD----GPWVLTSFSVLVASLLALACVGLFPVNVYHLHILGIEYFFYFAAMSV 143

Query: 155 ATIILYFLTLSARVNHKAICSTPLFIVSALGLTAASSLALMVDWGILDFAPCSHHDGSI- 213
           A  ++Y L+   R    A+  + L     LGL  A  L    D G++      +HD  + 
Sbjct: 144 AAYLVYLLSRRDRPKRFALRGSLLISGLTLGLLLAFILMAHTDDGVVASGTWFYHDLVMV 203

Query: 214 -------CGVAFAMWAQTNLVMIWCVTLALTIKKLARH 244
                  C V    WA     M W ++L  T ++  RH
Sbjct: 204 EPRPEFRCPVIME-WAALFSFMGWLLSLVWTQRETRRH 240