Pairwise Alignments

Query, 313 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 320 a.a., ABC-type multidrug transport system, ATPase component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  218 bits (556), Expect = 1e-61
 Identities = 123/302 (40%), Positives = 178/302 (58%), Gaps = 7/302 (2%)

Query: 10  IDSLRKTYKGGVEAVKGISLKVEAGDFFALLGPNGAGKSTTIGVICSLVQKSSGKVKVFE 69
           +  + KTY GG +A+K + L +  G+ FALLGPNGAGK+T I ++C +   S G V    
Sbjct: 17  VRGVSKTYAGGFQALKRVDLDIRRGEIFALLGPNGAGKTTLISIVCGIANASEGVVIADG 76

Query: 70  HDIDTQLELAKMSIGLVPQEFNFNQFETVQQIVVNQAGYFGVSREVAFERAKKYLSQLDL 129
           HD       A+ +IGLVPQE + + FE+V   V    G FG + +  +   +K L  L L
Sbjct: 77  HDTVRDYRAARAAIGLVPQELHTDAFESVWATVNFSRGLFGKAPDPVY--IEKVLRDLSL 134

Query: 130 WDKRNSPSRALSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWTFLTDLNRQG 189
           WDK+++    LSGGMKRR++IA+AL HEPK+L LDEP+AGVD+ELR  MW  + +L  +G
Sbjct: 135 WDKKDNKILTLSGGMKRRVLIAKALSHEPKILFLDEPSAGVDVELRHDMWRMVRELRDRG 194

Query: 190 VTIILTTHYLEEAEMLCRNIGIIDKGELVECTSMKSLLSRLNMETFVFDLKADINEAP-T 248
            TIILTTHY+EEAE +   IG+I++GEL+       L+ +L  +     L+  ++  P  
Sbjct: 195 TTIILTTHYIEEAEDMADRIGVINRGELIVVEDKDVLMRKLGKKQLTITLQHPLDRLPEA 254

Query: 249 LEGISCRLTDP-HTL--EVDVEKAHS-INSVFAQLTEQGIEVLSMRNKANRLEELFVELV 304
           L      LT   HTL    D +K  + I  +   L  QGI+   +++  + LE++FV LV
Sbjct: 255 LARWPLELTGAGHTLTYTFDTQKDETGIAELLRTLHAQGIDFKDLQSSESSLEDIFVSLV 314

Query: 305 EQ 306
            +
Sbjct: 315 HK 316