Pairwise Alignments

Query, 176 a.a., 2'-5' RNA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 187 a.a., RNA 2',3'-cyclic phosphodiesterase from Ralstonia solanacearum PSI07

 Score = 44.3 bits (103), Expect = 1e-09
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 8/133 (6%)

Query: 3   RLFLAIAPDAAQLEQLTQ----LQASLDGEGRLVPRDNLHMTLAFLGQCSEAQQEALSES 58
           RLFLA+ PDA    ++ Q    L+  +  + + +  + LH+TL  LG   E     ++ +
Sbjct: 8   RLFLAVTPDADAARRIAQRVELLRPDVGFKAKPLRAERLHVTLHHLGDFVELPAALVTHA 67

Query: 59  LARLAHQRRLPTFEVTLNTLEHWV---KPKILCLKGAARDPGLISLFNQCQRLAQQLGLH 115
              +A    LP FEVT + +  +      +   L G A    LI   +      ++ GL 
Sbjct: 68  CEAMAGVA-LPPFEVTFDQVVSFHGRRDHRPFVLTGGAGLHALIDFQHALGGALERAGLR 126

Query: 116 TSEHSFTPHITLM 128
             +  F PHITL+
Sbjct: 127 VPQARFVPHITLL 139