Pairwise Alignments

Query, 176 a.a., 2'-5' RNA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 165 a.a., 2'-5' RNA ligase from Pseudomonas sp. S08-1

 Score = 69.7 bits (169), Expect = 2e-17
 Identities = 57/171 (33%), Positives = 83/171 (48%), Gaps = 7/171 (4%)

Query: 1   MKRLFLAIAPDAAQLEQLTQLQASLDGEGRLVPRDNLHMTLAFLGQCSEAQQEALSESLA 60
           M RLF A+    +   Q+   +  L   GR VP  NLH+TLAFLG   E+    L E   
Sbjct: 1   MLRLFFALPCPPSIAAQIDAWRLQLAIPGRPVPSANLHLTLAFLGHLPESALALLEELPP 60

Query: 61  RLAHQRRLPTFEVTLNTLEHWVKPKILCLKGAARDPGLISLFNQCQRLAQQLGLHTSEHS 120
           RL    R   F++ L+ L+ W    +L L        L++L +   RL  + GL +   +
Sbjct: 61  RL--PLRELAFDLQLDRLDCW-HGGLLHLAPCQPPAELLALASGLARLLGKAGLPSDPRT 117

Query: 121 FTPHITLMRKAKMLPELKAPSLSLSGHALHLYHSQSSEQGVLYKVLASWPL 171
           + PH+TL R + +  ++ +P  +     L LY    SEQG  Y  LA+WPL
Sbjct: 118 YRPHLTLARDSCLPMQVDSPCFAWRPEELALYR---SEQG-RYLPLATWPL 164