Pairwise Alignments

Query, 176 a.a., 2'-5' RNA ligase (RefSeq) from Shewanella loihica PV-4

Subject, 177 a.a., RNA 2',3'-cyclic phosphodiesterase from Dickeya dianthicola ME23

 Score = 79.0 bits (193), Expect = 4e-20
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 8/174 (4%)

Query: 2   KRLFLAIAPDAAQLEQLTQLQAS--LDGEGRLVPRDNLHMTLAFLGQCSEAQQEALSESL 59
           +RLF A++   A  +Q+   +A+      GR V   NLH+TLAFLG+ S+A+ + L    
Sbjct: 5   RRLFFALSLPDAIGQQIVHWRAAQFAPEAGRPVAAANLHLTLAFLGEVSDAKMQVLQTLA 64

Query: 60  ARLAHQRRLPTFEVTLNTLEHWVKPKILCLKGAARDPGLISLFNQCQRLAQQLGLHTSEH 119
            R+    R P F   LN   HW +P ++ L       GL+ L +  +  A + G +    
Sbjct: 65  GRI----RQPAFTFNLNDAGHWPRPGVVWLGCRQAPRGLLQLADMLRSQAARNGCYQPPQ 120

Query: 120 SFTPHITLMRKAKMLPELKAPSL--SLSGHALHLYHSQSSEQGVLYKVLASWPL 171
            F PHITL+R A     + A +   ++      LY S++      Y+ +A WPL
Sbjct: 121 PFHPHITLLRGATRPVPVPAATFGWTVQAEQFFLYESRAEAGRTHYQPVAHWPL 174