Pairwise Alignments

Query, 731 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  212 bits (540), Expect = 4e-59
 Identities = 145/418 (34%), Positives = 221/418 (52%), Gaps = 15/418 (3%)

Query: 301 DPLTGLPNRAYFEALYDLANP-CQCER-STFVGFINLDRFQVVNNVSGHRAGDQLLCQLA 358
           D LTGLPNRAY   L + A    +CE  S  V  ++LD F+ VN+  GH  GD LL ++A
Sbjct: 131 DVLTGLPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVEVA 190

Query: 359 ARLSQLVRKEDVIARLSGDEFGILMPNIDVQIAEQVA-ERICQAMANHEFSWEGRSHSVS 417
            RL  ++R  D +ARLSGDEF +++ ++D +     A +R+ +A+A      E  + S+S
Sbjct: 191 QRLKSILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVRE-HTLSLS 249

Query: 418 VSMGLARCESEVDSVSDLLRRASAACRLAKEKGGNAWYFYSTQDPVVEKLNTEMSASVDI 477
            S+G+     + +    L+R A  A  +AK++G N ++ +       ++L         +
Sbjct: 250 ASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQE--QELKATHQTVARV 307

Query: 478 VGALANDRFELFYQPIEPLYASDDGLHLEILLRMRSTEGELIPPGIFLPAAERFNLAAKL 537
             AL N    L+YQP   L  +   L  E LLR +     ++PPG FLP  E+ +L  ++
Sbjct: 308 RRALRNGELCLYYQPKVNL-RTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEI 366

Query: 538 DRWVIDKLLRWGSENLALWQSLSM---VSVNLSALSISDSEFINWLEMRLLGEPELVSKL 594
             WVI + L      L  WQ       +SVN++A  +  S+F   L+  L   P +   L
Sbjct: 367 GEWVIGQAL----SQLQAWQRQGQPWSLSVNIAARHLQRSDFAERLQQLLAAYPAVDPAL 422

Query: 595 C-FEITETAAVSQLDHATGLINTVKPLGCKLALDDFGSGFSSFAYLKLLDVDYVKIDGQF 653
              EI E+ A+  L H +  ++  + LG + +LDDFG+G+SS +YLK L    +KID  F
Sbjct: 423 LDLEIVESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSF 482

Query: 654 IQHLCEDRADQAIVAAICQLGRDMAFEIVAEFVESVEVAKHLQKLGVEFGQGYGIARP 711
           ++ +  D+ D A+  A+  L R    E++AE +ESVE  + L  LG E  QGY IARP
Sbjct: 483 VRDILHDQDDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARP 540