Pairwise Alignments

Query, 731 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  200 bits (508), Expect = 4e-55
 Identities = 148/432 (34%), Positives = 222/432 (51%), Gaps = 37/432 (8%)

Query: 300  FDPLTGLPNRAYFE-ALYDLANPCQCERSTFV-GFINLDRFQVVNNVSGHRAGDQLLCQL 357
            +D LT LPNR  F+  LY+     + +++  V  F++LDRF+ +N+  GH AGD++L  +
Sbjct: 843  YDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDM 902

Query: 358  AARLSQLVRKEDVIARLSGDEFGILM---PNIDVQI--AEQVAERICQAMANHEFSWEGR 412
            A RL   V  +D +AR+ GDEF +L+   P  ++ +  A  VAE I  ++    F  E R
Sbjct: 903  ALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVR-PFVLENR 961

Query: 413  SHSVSVSMGLARCESEVDSVSDLLRRASAACRLAKEKGGNAWYFYSTQ--DPVVEKLNTE 470
               V+ S+G+A    +   +S L++ A  A   AKE+G N + FY  +     +E+L  E
Sbjct: 962  EFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLELE 1021

Query: 471  MSASVDIVGALANDRFELFYQPIEPLYASDDGLHL---EILLRMRSTEGELIPPGIFLPA 527
                 D+  A+  + F L+YQP      S DG  L   E LLR R     L+PPG F+P 
Sbjct: 1022 S----DLRHAMEQNEFILYYQP----QFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPV 1073

Query: 528  AERFNLAAKLDRWVIDKLLRWGSENLALWQSLSM----VSVNLSALSISDSEF----INW 579
             E   L   +  WV    LR  S  L  W    +    VSVN+SA   SD +      N 
Sbjct: 1074 IEELGLVVDVGDWV----LREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANI 1129

Query: 580  LEMRLLGEPELVSKLCFEITETAAVSQLDHATGLINTVKPLGCKLALDDFGSGFSSFAYL 639
            LE    G P    +L  E+TE+  + +++ A  ++ ++K LG  +A+DDFG+G+SS  YL
Sbjct: 1130 LEES--GLPPACLEL--ELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYL 1185

Query: 640  KLLDVDYVKIDGQFIQHLCEDRADQAIVAAICQLGRDMAFEIVAEFVESVEVAKHLQKLG 699
            K   +D +KID  F+  L E   D  I  AI  +   +   ++AE VE+ E  + L++ G
Sbjct: 1186 KQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHG 1245

Query: 700  VEFGQGYGIARP 711
             +  QGY   RP
Sbjct: 1246 CDEVQGYLFGRP 1257