Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 775 a.a., transglycosylase domain-containing protein from Rhizobium sp. OAE497

 Score =  237 bits (604), Expect = 2e-66
 Identities = 174/528 (32%), Positives = 263/528 (49%), Gaps = 30/528 (5%)

Query: 181 VLLDRMITGDGEDRLFVATDKIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAG 240
           V+ +R  TG     L   +  IP+AIV     +EDR FY H GV+P  + RA + N++ G
Sbjct: 133 VIANRGATGGEALPLEQMSPYIPQAIV----AIEDRRFYSHFGVDPMGLARAFVNNLT-G 187

Query: 241 RTVQGGSTLTQQLAKNFFLSSERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQD 300
           + +QGGSTLTQQLAKN FLS +R++ RK++E L++  ++ +Y KD+IL  YLN VY G +
Sbjct: 188 QPIQGGSTLTQQLAKNLFLSPDRTLERKVQEVLLSFWLEQKYSKDQILAMYLNRVYFGSN 247

Query: 301 KSRAVHGMGLASQFYFGRPIAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRL 360
                +G+  A++ YF +   ++ L + A L   +K P+  +P R PE A  R  +VL+ 
Sbjct: 248 ----AYGVEAAARRYFNKSARDVNLGEAALLAGLVKAPTRLSPARDPEAANARAQVVLQA 303

Query: 361 LMESGQLPVAQYKAAV-ESPLGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIK 419
           + + G +   + K A+ ++P   +       Q +     +V  EL    G  +  +  + 
Sbjct: 304 MRDQGYITDDEVKTAMTQTPAKAKSYWSGAGQYVA---DMVMDELPGLIGGDV--KEDVI 358

Query: 420 VYTTLDPLAQEAAEQAVRSTMKNLEQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFN 479
           V TT+D   ++ A+QA+   +     +  A Q  +V  D   A I A+VG K  +   FN
Sbjct: 359 VDTTIDKGLEKKADQALNDILSKEGVKLAASQAALVSIDGTGA-IRALVGGKDYAESQFN 417

Query: 480 RAVEIRRPIGSLIKPFVYATALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSG 539
           RAV+ +R  GS  KPFVYA AL  G   T A+   D PI + N     W+P+N  K+++G
Sbjct: 418 RAVKAKRQPGSSFKPFVYAAALEKG--LTPASVFNDAPIRIGN-----WTPENYEKKYNG 470

Query: 540 EVPLMTAFKKSMNVPTVNLGMAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVA 599
           EV L TA  KS+N     L M  G D V     + G +  +    S+ LG    S   + 
Sbjct: 471 EVTLATALAKSLNTVAAQLVMYDGPDQVIKLAHRLGIESELQPNASIALGTSEVSLEELT 530

Query: 600 QVYQTLADNGRYRQLNAVTHVLDADNQPLSASQRGADQAISVASDFLVQH---AMTQVVQ 656
             Y    + G     + +  V  A+ + L   +   D    V S+ +  +    M   ++
Sbjct: 531 ASYAAFMNGGYKATPHVIRRVTTAEGKVL--YENTYDNPPRVLSETIAANMNAMMMGTIE 588

Query: 657 SGTATKLGQAFPGVTLAGKTGTSNDSRDSWFAGFDERNVAAVWVGLDD 704
            GT        PG   AGKTGT+ +SRD+ F GF       VW G DD
Sbjct: 589 FGTGR--SARIPGWQAAGKTGTTQNSRDALFVGFTSNLTTGVWFGNDD 634