Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 774 a.a., penicillin-binding protein 1B from Pseudomonas fluorescens SBW25

 Score =  583 bits (1502), Expect = e-170
 Identities = 308/738 (41%), Positives = 447/738 (60%), Gaps = 7/738 (0%)

Query: 40  PGWGRRIWSLSW--KLGLILFAAMTIYSIYLDQIIARKFEGQKWHLPAQVFSRSMALYPG 97
           P  G R W L W  KLGL+    +  +++YLD ++  KF G++W +PA+V++R + L+ G
Sbjct: 14  PSRGLRPW-LGWALKLGLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFTG 72

Query: 98  AAVSHDQLIAELKLLGYRKVANPRQVGEFSASKTKVDLWRRPFLHPQGSQEAQRMMISFD 157
             +S D  + EL  LGYR+       G  + S   VDL  R F   +G ++AQ + + F 
Sbjct: 73  QKLSKDDFLTELDALGYRREPVSNGPGAAAVSGNTVDLNTRGFQFYEGLEKAQPVRVRFS 132

Query: 158 SQGVASVARSSDHRELAVFHLEPVLLDRMITGDGEDRLFVATDKIPKAIVDALILVEDRS 217
              VA ++ S +  +L V  LEP+++  +   + EDR+ +  D++P  +++ L+ VEDR 
Sbjct: 133 GDYVAELS-SLNGSKLPVVRLEPLMIGGIYPKNLEDRILIKLDQVPPYLLETLVAVEDRD 191

Query: 218 FYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFLSSERSIIRKLREALMAII 277
           FY H GV+P +I RA  VN S G+  QGGSTLTQQL KNF+L++ERS+ RKL EA+MA++
Sbjct: 192 FYHHWGVSPKSIARAVWVNTSGGKMTQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAML 251

Query: 278 IDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIAELTLPQQAFLVAAIKG 337
           ++  Y K EILEAYLNEV++GQD  RAVHG GLASQF+FG+P++EL L Q A LV  +KG
Sbjct: 252 LELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQFFFGQPLSELKLHQVALLVGMVKG 311

Query: 338 PSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESPLGVRKASKPVHQKLPAFF 397
           PSYYNP R PERA ERR+LVL +L + G     Q  AA + PLGV    K      P F 
Sbjct: 312 PSYYNPRRNPERALERRNLVLDVLEQQGVATAEQVAAAKKMPLGVTTRGKLADSSFPGFI 371

Query: 398 AVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRSTMKNLEQR--DKALQVGMV 455
            +V+ +L   + D  L + G++++T+ DP+ Q  AE +V  T K L  R     ++  MV
Sbjct: 372 DLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLTGRKGSDEVEAAMV 431

Query: 456 VTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVYATALTHGDKYTLATPLKD 515
           VT+  +  + AM+G +  S+ GFNRA++  RPIGSL+KP VY TAL    KYTL + L D
Sbjct: 432 VTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLVKPAVYLTALEKPSKYTLTSWLSD 491

Query: 516 EPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVNLGMAIGTDAVATTLAKSG 575
           +P+++  + G+ W+PQN +++  G + L      S N+ T  LG+ +G   V  T+A+ G
Sbjct: 492 DPLSVKGADGQVWTPQNFDRRSHGTIFLYQGIAHSYNISTSRLGLEVGVPNVLKTIARLG 551

Query: 576 WDETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNAVTHVLDADNQPLSASQRGA 635
                P +PS+LLGA   +P+ VA +YQTLA+ G    +  +  VL A+ +PL       
Sbjct: 552 VTREFPAFPSILLGAGAMTPMEVATMYQTLANGGFNTPMRGIRSVLTAEGEPLKRYPFQI 611

Query: 636 DQAISVASDFLVQHAMTQVVQSGTATKLGQAFP-GVTLAGKTGTSNDSRDSWFAGFDERN 694
            Q     S +L+Q+AM +V++ GT   +    P  +TLAGKTGTSNDSRDSWFAGF +  
Sbjct: 612 QQRFDAGSIYLIQNAMQRVMREGTGRSVYSVLPANLTLAGKTGTSNDSRDSWFAGFGQDV 671

Query: 695 VAAVWVGLDDNGKTSLYGSSGAMAVYQAFLKQRAPISLRRTPVNGVVSGYFDAKTGVAKQ 754
           +A VW+G DDNGKT   G++GA+ V+ +F+++  P+ L     + +V  + D  TG    
Sbjct: 672 LAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLNMPQPDNIVQAWIDPHTGQGSD 731

Query: 755 GNCGNVVAVPALAESYRP 772
            NC   V +P +  S  P
Sbjct: 732 ANCPGAVQMPYIRGSEPP 749