Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 703 a.a., carboxypeptidase from Magnetospirillum magneticum AMB-1

 Score =  241 bits (616), Expect = 8e-68
 Identities = 176/504 (34%), Positives = 257/504 (50%), Gaps = 29/504 (5%)

Query: 206 IVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFLSSERSI 265
           I  A++  EDR FY H GV+P  + RA  VN+ AG TVQGGST+TQQLAKN FL+ +R++
Sbjct: 143 IAQAVLATEDRRFYSHWGVDPIGLARALFVNLRAGHTVQGGSTITQQLAKNLFLTPDRNM 202

Query: 266 IRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIAELTL 325
            RK++E LMA+ ++ R+ K++IL  YLN VY+G        G+  A++ YF     ++ +
Sbjct: 203 KRKVQEVLMALWLEKRFSKEQILGLYLNRVYLGS----GTFGVDAAAKRYFDVSARKVDV 258

Query: 326 PQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESPLGVRKA 385
            Q A L   +K PS Y+P   PE +++R   VL  ++++G +     K A    + V  A
Sbjct: 259 YQAAVLAGLLKAPSRYSPLNDPEASRKRTSDVLANMVKAGYI---DQKTA--DNVQVTGA 313

Query: 386 SKPVHQKLPA--FFAVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRSTMKNL 443
           ++ V + +PA  +FA        +FG+  +    I V+TT+D   Q   E  +++ M   
Sbjct: 314 AQLVRRPIPAGRYFADWLMANLDQFGE--VAGKDIVVHTTMDIALQRKVEADLKTMMAGP 371

Query: 444 EQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVYATALTH 503
             +  A Q G VV       I A+ G K      FNRA +  R  GS  KPFVY TA+  
Sbjct: 372 GAKANASQ-GAVVVMSPDGAIRALTGGKDYDDSQFNRATQGLRQPGSSFKPFVYLTAMEM 430

Query: 504 GDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVNLGMAIG 563
           G   T    ++D+PI L N     WSP N   ++ G + L  A  +S+N   V L   +G
Sbjct: 431 G--RTPDDEVEDKPIRLGN-----WSPGNYTGKYLGPITLRQALAESVNTVAVRLVEEVG 483

Query: 564 TDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNAVTHVLDA 623
              V  T  + G    +    ++ LG    S L +   Y  LA+ G       V+H+ D 
Sbjct: 484 PGRVIATARRLGITSDLRNDATLALGTSEVSLLELTTAYAALANGGYGVTSFGVSHITDP 543

Query: 624 DNQPLSASQRGA-DQAISVASDFLVQHAMTQVVQ--SGTATKLGQAFPGVTLAGKTGTSN 680
             + L   Q G   Q +S A+   +   M+ VV   SG A +L +      +AGKTGT+ 
Sbjct: 544 SGKVLYQRQGGGFGQVVSPAALSRMHDMMSAVVTQGSGKAARLDR-----PVAGKTGTTQ 598

Query: 681 DSRDSWFAGFDERNVAAVWVGLDD 704
           D RD+WF GF    VA VW+G DD
Sbjct: 599 DYRDAWFMGFTADYVAGVWMGNDD 622