Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 827 a.a., bifunctional glycosyl transferase/transpeptidase from Erwinia tracheiphila SCR3

 Score =  568 bits (1463), Expect = e-166
 Identities = 314/722 (43%), Positives = 431/722 (59%), Gaps = 13/722 (1%)

Query: 44  RRIW-SLSWKLGLILFAAMTIYSIYLDQIIARKFEGQKWHLPAQVFSRSMALYPGAAVSH 102
           RR W  L  K  L+    M  Y  YLD  I  + +G+ W LPA V+ R + L PG +++ 
Sbjct: 59  RRGWLGLFVKPALVFILVMIAYGFYLDGQIRSRIDGKVWQLPAAVYGRMVNLEPGMSLNK 118

Query: 103 DQLIAELKLLGYRKVANPRQVGEFSASKTKVDLWRRPFLHPQGSQEAQRMMISFDSQGVA 162
             +IA L+   YR+V    + GEF+     ++L RRPF      +   R  ++F + G+ 
Sbjct: 119 SGMIALLEGTQYRQVTRMTRPGEFTVQGNSIELLRRPFDFADSKEGQIRARLTFSNDGLN 178

Query: 163 SVARSSDHRELAVFHLEPVLLDRMITGDGEDRLFVATDKIPKAIVDALILVEDRSFYEHH 222
            +      R+   F L+P L+  + + +GE RLFV     P  +VD L+  EDR FY+H 
Sbjct: 179 EIKNLDSGRDFGFFRLDPRLITMLQSPNGEQRLFVPRAGFPDLLVDTLVATEDRHFYQHD 238

Query: 223 GVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFLSSERSIIRKLREALMAIIIDFRY 282
           G++ ++I RA + NI+AGR VQGGSTLTQQL KN FL++ERS+ RK  EA MA+I+D RY
Sbjct: 239 GISFYSIGRAFLANITAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMDARY 298

Query: 283 DKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIAELTLPQQAFLVAAIKGPSYYN 342
            KD ILE YLNEVY+GQ  +  + G  LAS +YFGRP+ EL+L QQA LV  +KG S YN
Sbjct: 299 SKDRILELYLNEVYLGQAGNDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVKGASLYN 358

Query: 343 PWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESPLGVRKASKPVHQKLPAFFAVVRG 402
           PWR P  A ERR+LVLRLL +   +    Y      PLGV+     +  + PAF  +VR 
Sbjct: 359 PWRNPTLALERRNLVLRLLQQQKVIDQELYDMLSARPLGVQPKGGVITPQ-PAFMQMVRN 417

Query: 403 ELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRSTMKNLEQRD--KALQVGMVVTDKY 460
           EL  + GD +   SG+K++TTLDPL+Q+AAE+AV   +  L ++     L+  MV+ D++
Sbjct: 418 ELQAKLGDKVKDLSGVKIFTTLDPLSQDAAEKAVEEGVPALRKQRGLNDLETAMVIVDRF 477

Query: 461 SAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVYATALTHGDKYTLATPLKDEPITL 520
           S  + AMVG   P + G+NRA++ RR IGSL KP  Y TAL+  DKY L T + D PI L
Sbjct: 478 SGEVRAMVGGADPQFAGYNRALQARRSIGSLAKPATYLTALSQPDKYRLNTWIADNPIAL 537

Query: 521 TNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVNLGMAIGTDAVATTLAKSG-WDET 579
               G+ W PQN +++FSG+V L+ A   SMNVPTVNLGM +G   V  T  + G   + 
Sbjct: 538 KQPNGQIWKPQNDDRRFSGQVMLVDALAHSMNVPTVNLGMTLGLPQVVDTWTRLGVAKDQ 597

Query: 580 IPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNAVTHVLDADNQPLSASQRGADQAI 639
           +   P+MLLGA+N +P+ VAQ +QT+A  G   QL+AV  V+  D   L  S   A++A+
Sbjct: 598 LQPVPAMLLGALNLTPIEVAQAFQTIASGGNRAQLSAVRSVIAEDGTVLYQSFPQAERAV 657

Query: 640 SVASDFLVQHAMTQVVQSGTATKLGQAFPGVTLAGKTGTSNDSRDSWFAGFDERNVAAVW 699
              + +L  +AM QV + GTA  LG  +    LAGKTGT+N+  DSWFAG D + VA  W
Sbjct: 658 PAQTAYLTLYAMQQVAEEGTARALGARYAKAHLAGKTGTTNNQIDSWFAGVDGKEVAITW 717

Query: 700 VGLDDNGKTSLYGSSGAMAVYQAFLKQRAPISLRRTPVNGVVSGYFDAKTGVAKQGN--C 757
           +G D+N  T LYG+SGAM +Y+ +L  +AP+ L  TP   +      A   V   GN  C
Sbjct: 718 IGRDNNQSTKLYGASGAMQIYRRYLDNQAPMPLLPTPPEDI------APMNVDSAGNFVC 771

Query: 758 GN 759
           G+
Sbjct: 772 GS 773