Pairwise Alignments

Query, 789 a.a., penicillin-binding protein 1B (RefSeq) from Shewanella loihica PV-4

Subject, 697 a.a., PBP1A family penicillin-binding protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  295 bits (754), Expect = 7e-84
 Identities = 189/532 (35%), Positives = 278/532 (52%), Gaps = 22/532 (4%)

Query: 200 DKIPKAIVDALILVEDRSFYEHHGVNPFAIIRAAMVNISAGRTVQGGSTLTQQLAKNFFL 259
           D +P  +  A I +EDR FY H G +P  ++RA   N+ AGR VQGGSTLTQQLAKN FL
Sbjct: 89  DALPDYVPAAFIAIEDRRFYHHPGFDPIGMMRAMATNVRAGRVVQGGSTLTQQLAKNLFL 148

Query: 260 SSERSIIRKLREALMAIIIDFRYDKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRP 319
           + ++++ RK++E ++A+ ++ ++ K EIL  YLN VY G       +G+  ASQ YF + 
Sbjct: 149 TPDQNMRRKVQELMLAVWLEMKFSKKEILALYLNRVYFG----AGAYGIEAASQRYFDKS 204

Query: 320 IAELTLPQQAFLVAAIKGPSYYNPWRFPERAQERRDLVLRLLMESGQLPVAQYKAAVESP 379
              LT+ + A L   +K PS Y+P    ERA  R  +VL  + E+G +  AQ + AV  P
Sbjct: 205 AKNLTVGEAALLAGLLKAPSRYSPVSESERAAARATVVLNEMEEAGVITAAQREQAVTQP 264

Query: 380 LGVRKASKPVHQKLPAFFAVVRGELSRRFGDSLLQQSGIKVYTTLDPLAQEAAEQAVRST 439
           + V +     H +   F   +   +    G+       + V TTLD   Q AAE++VR  
Sbjct: 265 VIVSRTLATQHAQY--FIDWLDKSIRSLVGE---PTEDMVVETTLDLTLQTAAERSVRRI 319

Query: 440 MKNLEQRDKALQVGMVVTDKYSAGIAAMVGDKVPSYQGFNRAVEIRRPIGSLIKPFVYAT 499
           +       K +Q   +V       + AM+G    +   FNRAV+ +R  GS  KPFVY  
Sbjct: 320 LD--RDAGKGVQQAALVALDGDGRVRAMIGGSSYADSQFNRAVDAKRQAGSAFKPFVYLA 377

Query: 500 ALTHGDKYTLATPLKDEPITLTNSQGKTWSPQNVNKQFSGEVPLMTAFKKSMNVPTVNLG 559
           A+  G  YT  TP+ D+PIT+ N     WSP+N +  FSG + L  A  +S N     + 
Sbjct: 378 AVEAG--YTPQTPVVDQPITIGN-----WSPRNYSGTFSGNMTLAQAVAQSTNTVAAYVA 430

Query: 560 MAIGTDAVATTLAKSGWDETIPEYPSMLLGAVNGSPLMVAQVYQTLADNGRYRQLNAVTH 619
             +G D+VA    + G +  I   P+M LGAV  SP+ +A  Y   A+ GR      ++ 
Sbjct: 431 DQVGRDSVARAARRLGIESRIGLEPAMALGAVEVSPIEMATAYDAFANGGRRVDAYGISR 490

Query: 620 VLDADNQPLSASQRG-ADQAISVASDFLVQHAMTQVVQSGTATKLGQAFPGVTLAGKTGT 678
           +     + +   Q G + QAI+  S + +   +  VV SG+      A  G  LAGKTGT
Sbjct: 491 IRTPQGRVIYQRQSGQSGQAINNPSLYYMNQMLRGVVTSGSGR--SAAISGRDLAGKTGT 548

Query: 679 SNDSRDSWFAGFDERNVAAVWVGLDDN-GKTSLYGSSGAMAVYQAFLKQRAP 729
           ++D +D+WF G+    V AVWVG DDN     + G S   A+++ F++   P
Sbjct: 549 TSDYKDAWFVGYTGGFVTAVWVGKDDNTAMRGVTGGSSPAAIWKGFMEAALP 600