Pairwise Alignments

Query, 462 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 462 a.a., sigma-54 dependent transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  179 bits (455), Expect = 1e-49
 Identities = 133/468 (28%), Positives = 216/468 (46%), Gaps = 27/468 (5%)

Query: 5   RNILLVDDEASWLRTLAVTLNRLVPEAEIDTCVDSRQVLNRLQVGDYALVLLDLTMPFHS 64
           + +L++DDE      L +TL R+  + ++D      +    L    Y L   D+ +P  +
Sbjct: 4   QTVLVIDDERDIRELLTITLGRM--DLQVDAVGTVAEARRALAERSYDLCFTDMRLPDGT 61

Query: 65  GEELLGMIRAEHPNTRVIIVTGVNEVDTAVRCIKHGAYDYFIKTDNVSDLAHTVRRALEV 124
           G E++ +I AEHP+  V ++T    VD AV  +K GA+D+  K  ++  L   VR AL +
Sbjct: 62  GHEIIELIAAEHPDMPVAMITAYGNVDAAVNALKAGAFDFVSKPVDIQMLRGLVRTALRL 121

Query: 125 VGLERNYLHIKERFLSRTLDNPKAFNNILTCEPVLLDQFRYLEAVAFSPEPLLIHGESGT 184
               R+         ++T D+ +   +    + V       +  +A +  P+ I GESG 
Sbjct: 122 AEERRS-----GAAAAKTGDSSRLIGDSSAMQQVRAT----IAKLARNQAPVYIAGESGV 172

Query: 185 GKSEFARSCHQLFSPEQ-PFVSLNLAGINSDTFELKLCGRLSHKPNGEVDAVTGMLHQAG 243
           GK   AR  H+       PFV +N   I S+  E +  G       G      G+   A 
Sbjct: 173 GKELVARLIHEQGPRASGPFVPVNCGAIPSELMESEFFGHRKGSFTGASTDKEGLFQAAQ 232

Query: 244 SGVLYLSEIGALPLSAQITLLELIESRSYSPQGSDSRFPIKCKFVVSTQDDLLTLNKAGE 303
            G L+L E+  LPL  Q+ LL  I+ ++  P G     P+  + + +T  +L  L + G+
Sbjct: 233 GGTLFLDEVAELPLHMQVKLLRAIQEKAVRPIGGRDEIPVDARILSATHKNLGQLVEQGQ 292

Query: 304 FRSDLLYRLRAHKIRLPRLAERPLDIAMLINHFIAEAAEEMSLSAPQQPRDLAPKLLDYD 363
           FR DL YR+   ++R+P L ER  D++ L    +   A +   S  Q        L  YD
Sbjct: 293 FRQDLFYRINVIELRVPPLRERRGDVSQLSAFILKALAGKSGESVGQLSPSARGALEAYD 352

Query: 364 FPGNLNELKGMVFDAVSRSDGVTLNISPFM----EAIKEHKSLDAAPGDHIIFPKSLPT- 418
           FPGN+ EL+ ++  A++  DG T+  +  M     A   H+   AAPG       +  T 
Sbjct: 353 FPGNVRELENILERAMAMCDGSTIEAADLMLPQRSARPSHE--PAAPGQPSAPAAAASTG 410

Query: 419 --------LAQMNQALIDEAMSRTANNQTAAAQILGISQSALSRRLTK 458
                   ++ + +  I +A+  +  N+TAAA+ LGI+  AL  +L K
Sbjct: 411 ADGGLDDYISNLERTAIVKALEESRYNKTAAARKLGITFRALRYKLKK 458