Pairwise Alignments

Query, 462 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 478 a.a., two-component system DNA-binding transcriptional dual regulator GlnL/GlnG from Pseudomonas putida KT2440

 Score =  174 bits (442), Expect = 4e-48
 Identities = 135/480 (28%), Positives = 237/480 (49%), Gaps = 44/480 (9%)

Query: 1   MKLARNILLVDDEASWLRTLAVTLNRLVPEAEIDTCVDSRQ-VLNRLQVGDYALVLLDLT 59
           M  +  + +VDD+ S    L   L +   E       DS   V+ RL      +++ D+ 
Sbjct: 1   MSRSETVWIVDDDRSIRWVLEKALQQ---EGMTTQSFDSADGVMGRLARQQPDVIISDIR 57

Query: 60  MPFHSGEELLGMIRAEHPNTRVIIVTGVNEVDTAVRCIKHGAYDYFIKTDNVSDLAHTVR 119
           MP  SG +LL  IR +HP   VII+T  +++D+AV   + GA++Y  K  +V +    V+
Sbjct: 58  MPGTSGLDLLAQIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVK 117

Query: 120 RALEVVGLERNYLHIKERFLSRTLDNPKAFNNILTCEPVLLDQFRYLEAVAFSPEPLLIH 179
           RA +    E+  L + +  L+RT +       I+   P + + FR +  ++ S   +LI+
Sbjct: 118 RANQHAQ-EQQGLDVPQN-LARTPE-------IIGEAPAMQEVFRAIGRLSHSNITVLIN 168

Query: 180 GESGTGKSEFARSCHQLFSPE--QPFVSLNLAGINSDTFELKLCGRLSHKPNGEVDAVTG 237
           GESGTGK   A + H+  SP    PF++LN+A I  D  E +L G       G  +   G
Sbjct: 169 GESGTGKELVAHALHR-HSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRG 227

Query: 238 MLHQAGSGVLYLSEIGALPLSAQITLLELIESRSYSPQGSDSRFPIKCKFVVSTQDDLLT 297
              QA  G L+L EIG +P   Q  LL ++    +   G      +  + + +T  +L +
Sbjct: 228 RFEQADGGTLFLDEIGDMPADTQTRLLRVLADGEFYRVGGHVPVKVDVRIIAATHQNLES 287

Query: 298 LNKAGEFRSDLLYRLRAHKIRLPRLAERPLDIAMLINHFIAEAAEEMSLSAPQQPRDLAP 357
           L +AG+FR DL +RL   +I +PRLA+R  DI  L  HF+A AA+E+++    +P+ L P
Sbjct: 288 LVQAGKFREDLFHRLNVIRIHIPRLADRREDIPALARHFLARAAQELAV----EPKILKP 343

Query: 358 KLLDY----DFPGNLNELKGMV--FDAVSRSDGVTLN---------------ISPFMEAI 396
           +  ++     +PGN+ +++        ++ S  V +                ++ + +A+
Sbjct: 344 ETEEFIRNLPWPGNVRQMENTCRWITVMASSREVLIGDLPPELLNLPHDAAPVTNWEQAL 403

Query: 397 KEHKSLDAAPGDHIIFPKSLPTLAQMNQALIDEAMSRTANNQTAAAQILGISQSALSRRL 456
           ++      A G   +   ++P+  ++   +I+ A+  TA  +  AA +LG  ++ L+R++
Sbjct: 404 RQWADQALARGQTSLLDSAVPSFERI---MIETALKHTAGRRRDAALLLGWGRNTLTRKI 460