Pairwise Alignments

Query, 462 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 450 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  171 bits (432), Expect = 6e-47
 Identities = 134/460 (29%), Positives = 205/460 (44%), Gaps = 23/460 (5%)

Query: 6   NILLVDDEASWLRTLAVTLNRLVPEAEIDTCVDSRQVLNRLQVGDYALVLLDLTMPFHSG 65
           +IL+V+DE      +   L       E    V+   V+ +    D  LV  D  +   +G
Sbjct: 7   HILVVEDEPDQRALIVQMLTANQYLVESADSVEQAIVMIKASAPD--LVFSDWKLGQLTG 64

Query: 66  EELLGMIRAEHPNTRVIIVTGVNEVDTAVRCIKHGAYDYFIKTDNVSDLAHTVRRALEVV 125
            +LL  +R EHP+   II T    +  AV  ++ GA DY  K      L   + +  + +
Sbjct: 65  MDLLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKVAKSI 124

Query: 126 GLERNYLHIKERFLSRTLDNPKAFNNILTCEPVLLDQFRYLEAVAFSPEPLLIHGESGTG 185
            L+R     + R LS  L   +    ++    ++   ++ ++ V+ +   +LI GESGTG
Sbjct: 125 ALKR-----QNRRLSSELSQQQELVGLVGRSALMQKVYQRVQRVSATDATVLIGGESGTG 179

Query: 186 KSEFARSCHQLFS-PEQPFVSLNLAGINSDTFELKLCGRLSHKPNGEVDAVTGMLHQAGS 244
           K   AR+ +QL +   +PFV++N   I     E +L G       G      G L  A  
Sbjct: 180 KELAARALYQLSARSHKPFVAINCGAIPESLAEAELFGAEKGAYTGANTQKIGKLEAADG 239

Query: 245 GVLYLSEIGALPLSAQITLLELIESRSYSPQGSDSRFPIKCKFVVSTQDDLLTLNKAGEF 304
           G ++L EIG LPL  Q  LL  ++    S  G +S   +  + + +T  DL      G F
Sbjct: 240 GTVFLDEIGELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDLQQEVAEGRF 299

Query: 305 RSDLLYRLRAHKIRLPRLAERPLDIAMLINHFIAEAAEEMSLSAPQQPRDLAPKLLDYDF 364
           R DL YRL    I +P L ERP DI  L+ HF+   A +  +  P+  RD    LLD+ +
Sbjct: 300 REDLYYRLNVVPIHMPALRERPEDIGRLVEHFLKLHANQYGMEVPKLSRDTLKSLLDHSW 359

Query: 365 PGNLNELKGMVFDAVSRSDGVTLNISPFMEAIKEHKSLDAAP----GDHIIFPKSLPTLA 420
           PGN+ EL   +   V   D          E ++E   L AAP        + P++     
Sbjct: 360 PGNVRELANRIERFVLLGDE--------EEMVQE---LGAAPQPLDTKRFVLPEAGIEWE 408

Query: 421 QMNQALIDEAMSRTANNQTAAAQILGISQSALSRRLTKGQ 460
              +  + +A+ R   N+T AA+ LG+S  A   RL K Q
Sbjct: 409 SFEKDCLRQALDRFEGNRTKAAKCLGLSYKAFLYRLEKYQ 448