Pairwise Alignments

Query, 462 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 461 a.a., Regulatory protein AtoC from Escherichia fergusonii Becca

 Score =  181 bits (459), Expect = 4e-50
 Identities = 131/458 (28%), Positives = 214/458 (46%), Gaps = 9/458 (1%)

Query: 1   MKLARNILLVDDEASWLRTLAVTLNRLVPEAEIDTCVDSRQVLNRLQVGDYALVLLDLTM 60
           M     IL+VDDE +  R L+      +   E     + R  L+        +VL+D+ M
Sbjct: 1   MTAINRILIVDDEDNVRRMLSTAF--ALQGFETHCANNGRTALHLFADIHPDVVLMDIRM 58

Query: 61  PFHSGEELLGMIRAEHPNTRVIIVTGVNEVDTAVRCIKHGAYDYFIKTDNVSDLAHTVRR 120
           P   G + L  +R+    T VI++T   EV+TAV  ++ GA+DY IK  ++ +L   V+R
Sbjct: 59  PEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQR 118

Query: 121 ALEVVGLERNYLHIKERFLSRTLDNPKAFNNILTCEPVLLDQFRYLEAVAFSPEPLLIHG 180
           AL++  +++   H     L + L     + +ILT  P ++D  +    +A S   +LI G
Sbjct: 119 ALQLQSMKKEIRH-----LHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISG 173

Query: 181 ESGTGKSEFARSCH-QLFSPEQPFVSLNLAGINSDTFELKLCGRLSHKPNGEVDAVTGML 239
           ESGTGK   AR+ H      + PF+ +N A +     E +L G       G      G+ 
Sbjct: 174 ESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLF 233

Query: 240 HQAGSGVLYLSEIGALPLSAQITLLELIESRSYSPQGSDSRFPIKCKFVVSTQDDLLTLN 299
            +A  G L L EIG +PL  Q  LL +++ R +   G      +  + + +T  DL  + 
Sbjct: 234 ERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMV 293

Query: 300 KAGEFRSDLLYRLRAHKIRLPRLAERPLDIAMLINHFIAEAAEEMSLSAPQQPRDLAPKL 359
           K G FR DL YRL    + LP L +R  DI++L NHF+ + + E               L
Sbjct: 294 KEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLL 353

Query: 360 LDYDFPGNLNELKGMVFDAVSRSDGVTLNISPFMEAIKEHKSLDAAPGDHIIFPKSL-PT 418
             + +PGN+ EL  ++  AV  + G  +        I++            +  ++L   
Sbjct: 354 TAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEAKTAPVGERNLKEE 413

Query: 419 LAQMNQALIDEAMSRTANNQTAAAQILGISQSALSRRL 456
           + ++ + +I E + +   N+T  A +LGIS+ AL  +L
Sbjct: 414 IKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKL 451