Pairwise Alignments

Query, 462 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 471 a.a., Regulatory protein AtoC from Acinetobacter radioresistens SK82

 Score =  172 bits (437), Expect = 2e-47
 Identities = 131/469 (27%), Positives = 223/469 (47%), Gaps = 30/469 (6%)

Query: 7   ILLVDDEASWLRTLAVTLNRLVPEAEIDTCVDSRQVLNRLQVGDYALVLLDLTMPFHSGE 66
           ILLVDDE      + ++L ++     I   ++  + L   Q   Y   L DL +P  +G 
Sbjct: 8   ILLVDDEEDLCTLMQMSLAKINIRTHIAHGLEQAKKL--FQQHAYDACLTDLNLPDGNGL 65

Query: 67  ELLGMIRAEHPNTRVIIVTGVNEVDTAVRCIKHGAYDYFIKTDNVSDLAHTVRRALEVVG 126
           EL+  +   +P T + ++T    ++ A+  +K GA+D+  K  N + L   V++AL    
Sbjct: 66  ELVQYVSQLYPCTPIAVLTAYGNMEIAISALKAGAFDFVSKPVNQAHLQQLVQKAL---- 121

Query: 127 LERNYLHIKERFLSRTLDNPKAFNNILTCEPVLLDQFRYLEAVAFSPEPLLIHGESGTGK 186
              N     ++ +   L+N       L  + + +     L+ +A S  P+ I GESGTGK
Sbjct: 122 ---NTPQSAQQLVQDALENRMLIGTSLPIQQLKIA----LKKIARSQAPVFITGESGTGK 174

Query: 187 SEFARSCHQLFS-PEQPFVSLNLAGINSDTFELKLCGRLSHKPNGEVDAVTGMLHQAGSG 245
              A   H+L +  + PF+++N   I SD  E +L G       G      G+++ A  G
Sbjct: 175 EVVANLVHRLSNRSDGPFIAINCGAIPSDLMESELFGHKKGSFTGASQDKQGLIYSAHGG 234

Query: 246 VLYLSEIGALPLSAQITLLELIESRSYSPQGSDSRFPIKCKFVVSTQDDLLTLNKAGEFR 305
            L+L EI  LPL+ Q+ LL  ++ +   P GSD    +  + + ++  DL  L + G+FR
Sbjct: 235 SLFLDEIAELPLAMQVKLLRAVQEKKIRPIGSDQEIDVDFRVISASHQDLEILVQQGKFR 294

Query: 306 SDLLYRLRAHKIRLPRLAERPLDIAMLINHFIAEAAEEMSLSAPQQPRDLAPKLLDYDFP 365
            DL +R+    I LP L ER  DI +L  HFI E  +E  +            L+   FP
Sbjct: 295 QDLFFRIHVMDIVLPPLREREDDILLLAKHFIQEVCKEWDIPNKILTERGQQFLMQQYFP 354

Query: 366 GNLNELKGMVFDAVSRSDGVTLNISPFMEA-IKEHKSLDAAPGDH-----IIFP----KS 415
           GN+ EL+ ++  A++ SD   +++     A ++  ++  A   +H      + P    + 
Sbjct: 355 GNVRELRNIIERAITLSDNEYIDLPQLQSAPLRNVQNFVAGQINHEPLTDQVIPLSPHRK 414

Query: 416 LPT------LAQMNQALIDEAMSRTANNQTAAAQILGISQSALSRRLTK 458
           +P       L  + + ++  A+++T  N+T AA+ LG+S  +L  RL K
Sbjct: 415 IPAEGLEQYLENIEKEVLLTALNQTHWNRTLAAKKLGMSFRSLRYRLKK 463