Pairwise Alignments

Query, 289 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 295 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas sp. S08-1

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 21/253 (8%)

Query: 41  FTLIRIASGALVLGILASRHIRAGELGGNW---LSATALFG---YAVAFSFAYNSLSAGT 94
           F  +R A  AL L  L       G L   W   +    L G   + + F   +  + AG 
Sbjct: 35  FCALRFALAALPLLFLR------GPLPAPWWRIVQIGVLLGVIKFGLLFVGMHLGMPAGL 88

Query: 95  GALLLFGAVQITMILYGLWSGERINRKQMIGALLAGAGLVWLVLPGVSAPPLIGAMLMII 154
            +L+L   V  T+++  L  GER + + + G +LA  GLV + L       L+G +L+++
Sbjct: 89  SSLVLQSQVFFTVLIAALVLGERPSMRALAGLVLAAGGLVLIGLQRPLGDSLLGFVLVVV 148

Query: 155 AGVSWGVYSLLGRGTKRPTLATAGNFIRAVPMALV---------PFALLSNSETISATGI 205
           A ++W   ++  + +    +     ++  VP+  +         P A+ +    +S  G+
Sbjct: 149 AALAWAFSNIATKRSGASDMLRLICWVSLVPVLPLLGLSWLFEGPQAMGAALSDLSWRGV 208

Query: 206 GYAVASGALASGLGYALWYLVLPSLSAVTAATVQLSVPIIAAFGGFIWIGEAFTSRLLLA 265
           G  +    LA+ LG+A+W  +L    A       L+VP+     G++ +GEA T    LA
Sbjct: 209 GALLYIAFLATTLGFAIWSFLLRRYPASQVTPFALAVPVSGLLAGWLLLGEALTPLGWLA 268

Query: 266 SIAVLGGIALFVM 278
              V GG+A+ V+
Sbjct: 269 CALVFGGLAINVL 281