Pairwise Alignments

Query, 289 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 301 a.a., cystine transporter YijE from Escherichia coli ECRC98

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 18/268 (6%)

Query: 36  IGAASFTLIRIASGALVLGI---LASRHIRAGELGGNWLSATALF---GYAVAFSFAYNS 89
           IGA  FT +R   GALVL I   L  R +R       +  A AL    G      +A  S
Sbjct: 36  IGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPF--KYTLAIALLQTCGMVGLAQWALVS 93

Query: 90  LSAGTGALLLFGAVQITMILYGLWSGERINRKQMIGALLAGAGLVWLVLPG-VSAPPLIG 148
             AG  A+L +      +I   ++ GER+ R Q    L+A  GL  ++ P  +    +  
Sbjct: 94  GGAGKVAILSYTMPFWVVIFAAVFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKS 153

Query: 149 AMLMIIAGVSWGVYSLLGRG--TKRPTL----ATAGNFIRAVPMALVPFALLSNSETISA 202
           AML I++GVSWG  +++ +    + P +     T+   + A  +  V   L+   E    
Sbjct: 154 AMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQ 213

Query: 203 TGIGYAVA-SGALASGLGYALWYLVLPSLSAVTAATVQLSVPIIAAFGGFIWIGEAFTSR 261
             + +A+A S  LA+ L ++LW  VL +L A  A+   L+VP+      +  +GE     
Sbjct: 214 PTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGE--NPG 271

Query: 262 LLLASIAVLGGIALFVMSKQSSHVIKDK 289
            +  S  VL  +AL ++S++    +  K
Sbjct: 272 AVEGSGIVLIVLALALVSRKKKEAVSVK 299