Pairwise Alignments

Query, 531 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

Subject, 562 a.a., long-chain-fatty-acid/CoA ligase from Pseudomonas putida KT2440

 Score =  502 bits (1292), Expect = e-146
 Identities = 271/549 (49%), Positives = 357/549 (65%), Gaps = 34/549 (6%)

Query: 9   VDLQKYASLIDLIETAAERYGDKTAYVCLGKASSFADIERDSRYFAAYLQQHTQLEVGDK 68
           +D+  YAS++++ E + +R+ D+ A+  LG   S+A++ER S  FAA+LQQHT L+ G++
Sbjct: 18  IDINAYASVVEVFERSCKRFADRPAFSNLGVTLSYAELERHSAAFAAWLQQHTDLKPGER 77

Query: 69  VAIQLPNITQFVIAAYGALRAGMILVNTNPLYTQRELIHQYRDSDAKALVVLSDLLPTLE 128
           +A+Q+PN+ Q+ IA +GA+RAG+I+VNTNPLYT+RE+ HQ++DS A+ALV L+     ++
Sbjct: 78  IAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTEREMRHQFKDSGARALVYLNMFGKRVQ 137

Query: 129 TVIPETQIETVISTHPLDLIATQPQADSQLAH------------------IGFNQVLALG 170
            V+P+T IE +I     DL+   P A   L +                  + F QVL  G
Sbjct: 138 EVLPDTGIEYLIEAKMGDLL---PAAKGWLVNTVVDKLKKMVPAYRLPQAVPFKQVLREG 194

Query: 171 SQAEYRPVEVAQQSLAALQYTGGTTGLSKGAMLSHSNLLANMLQVQSRLASK-------F 223
                +PV +    +A LQYTGGTTGL+KGAML+H NL+ANMLQV +  +          
Sbjct: 195 RGLSPKPVSLNLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVLACFSQHGPDGQKLL 254

Query: 224 VEGEEIFIAPLPIYHIYAFMVNFV-YFEQGGCSVLIPNPRDISALIQTMSQHPFTGFAGL 282
            +G+E+ IAPLP+YHIYAF  N +     G  +VLI NPRDI   I+ + +  F+   GL
Sbjct: 255 KDGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIPGFIKELGKWRFSALLGL 314

Query: 283 NTLFVGLCHQQSFQALDFSHLKITISGGTALTQAAASIWQSTTGCTISEGYGLSETSPVV 342
           NTLFV L     F+ LDFS LK+T SGGTAL +A A  W+  TGC I EGYGL+ETSPV 
Sbjct: 315 NTLFVALMDHPGFRQLDFSALKVTNSGGTALVKATAERWEDLTGCRIVEGYGLTETSPVA 374

Query: 343 SLNAPG-LECLGTIGRPVIDTQVKILDASEQEVPQGEIGELAVKGPQVMSGYWQKPEETA 401
           S N  G L  LGT+G PV  T  K++D    E+P GE GEL +KGPQVM GYWQ+PE TA
Sbjct: 375 STNPYGQLARLGTVGIPVAGTAFKVIDDDGNELPLGERGELCIKGPQVMKGYWQQPEATA 434

Query: 402 KVMTSDGFFKTGDIALATEDGMHKIVDRKKDMIIVSGFNVYPNEVEDVLAAHESVLECAV 461
           + + ++G+FKTGDIA+   DG  +IVDRKKDMIIVSGFNVYPNE+EDV+  H  V  CA 
Sbjct: 435 QALDAEGWFKTGDIAVIDPDGFTRIVDRKKDMIIVSGFNVYPNEIEDVVMGHPKVANCAA 494

Query: 462 IGVDDSRSGEAVKAAIVLREPELANDATKQALLEHCRAQLAAYKLPKIIEFMPALPKSTV 521
           IGV D RSGEAVK  +V RE  L+ D  K     +C+A    YK+PK I    +LP + V
Sbjct: 495 IGVPDERSGEAVKLFVVPREGGLSVDELK----AYCKANFTGYKVPKHIVLRESLPMTPV 550

Query: 522 GKILRRELR 530
           GKILRRELR
Sbjct: 551 GKILRRELR 559