Pairwise Alignments

Query, 531 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  210 bits (535), Expect = 1e-58
 Identities = 162/550 (29%), Positives = 253/550 (46%), Gaps = 60/550 (10%)

Query: 19  DLIETAAERYGDKTAYVCLGKASSFADIERDSRYFAAYLQQHTQ------LEVGDKVAIQ 72
           D  +    R+ D+ A V   +A  +       R  A  + QH +      ++ GD++ I 
Sbjct: 22  DAFDATVARFPDREALVVHHQALRYT-----WRQLADAVDQHARALMALGVQPGDRLGIW 76

Query: 73  LPNITQFVIAAYGALRAGMILVNTNPLYTQRELIHQYRDSDAKALV------------VL 120
            PN  ++ I  + + + G ILVN NP Y   EL +    S  + ++            +L
Sbjct: 77  APNCAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAML 136

Query: 121 SDLLPTLETVIPETQI-ETVISTHPLDLIATQPQADSQLAHIGFNQVLALGSQAEYRPVE 179
             LLP L +  P   I E       +  +A  P         GF    AL ++AE     
Sbjct: 137 QGLLPGLASSQPGALICERFPELRGVVSLALSPPP-------GFLAWHALQARAEV---- 185

Query: 180 VAQQSLAA------------LQYTGGTTGLSKGAMLSHSNLLANMLQVQSRLASKFVEGE 227
           V+ ++LAA            +QYT GTTG  KGA LSHSN+L N   V   L    +   
Sbjct: 186 VSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLG---LTEH 242

Query: 228 EIFIAPLPIYHIYAF-MVNFVYFEQGGCSVLIPNPRDISALIQTMSQHPFTGFAGLNTLF 286
           +  + P+P+YH +   M N      G   +   +  D  A ++ ++Q   T   G+ T+F
Sbjct: 243 DRLVVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMF 302

Query: 287 VGLCHQQSFQALDFSHLKITI-SGGTALTQAAASIWQSTTGCTISEGYGLSETSPVVSLN 345
           +           D S L+  I +G T   +    +        +   YG++ETSPV SL 
Sbjct: 303 IAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSPV-SLQ 361

Query: 346 APGLECLG----TIGRPVIDTQVKILDASEQEVPQGEIGELAVKGPQVMSGYWQKPEETA 401
               + L     ++GR     + K++DA    VP+GEIGEL  +G  VM GYW  P+ TA
Sbjct: 362 TGAADDLERRVTSVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATA 421

Query: 402 KVMTSDGFFKTGDIALATEDGMHKIVDRKKDMIIVSGFNVYPNEVEDVLAAHESVLECAV 461
           + + ++G+  TGD+A+  E G  +IV R KDMII  G N+YP E+E+    H +V +  V
Sbjct: 422 ESIDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQV 481

Query: 462 IGVDDSRSGEAVKAAIVLREPELANDATKQALLEHCRAQLAAYKLPKIIEFMPALPKSTV 521
           IGV  S+ GE + A + L      ++     L E  RA++A +K+P+   F+   P +  
Sbjct: 482 IGVPCSKYGEEIVAWVRLHPGHAVSEV---ELREWARARIAHFKVPRYFRFVDEFPMTVT 538

Query: 522 GKILRRELRK 531
           GK+ +  +R+
Sbjct: 539 GKVQKFRMRE 548