Pairwise Alignments

Query, 248 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

Subject, 275 a.a., putative Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 18/233 (7%)

Query: 15  LRMLTEEWAPMSYQEQGLPM-GYGVSLVQRLAKELGEEANIEVLPW-ARAFAIAEGQANV 72
           + +L E + P S+      + GY V + + +A +LG +  +E   W   A     G+ ++
Sbjct: 38  VNVLMESYPPFSFLNDHNQLDGYDVDVAKAVADKLGVKLRLETPSWDVIAAGRWSGRYDI 97

Query: 73  LLFATSLNEQRSRDFDF-VGPIATTSISIYAKADDRVNPASVAELDALGSVGV--YRGSL 129
            + + + ++ R+  FDF V   A+ ++ +   +D+R++ A   E   +GS+    Y   L
Sbjct: 98  CICSMTPSKARAEVFDFPVEYYASPAVIVVNASDERIHDAKDLEGRKVGSISASSYESYL 157

Query: 130 GESILTRQGVEHLTVASFPQQSARQLQHDRIRFWCQADLAVERLLAEVNMGLDEVHPVLE 189
            ++++     +      F    A     + + F     L     L  +   L    P L+
Sbjct: 158 NKNLVIEGKEDQKIDYPFDFVQAAPYDTENVAFQ-DLGLGTGVRLDAIITNLVTAQPRLQ 216

Query: 190 ------LAQIDLY-----LAFSKGTDPERVSRWHEALVKLQASGEMARLYHAW 231
                 LA   LY     +A  KG DPE  ++  E   +L+A G +A+L   W
Sbjct: 217 QDKRFKLAGAPLYEEPNAVAIEKG-DPEWDAKVREVFAELKADGTLAKLSQKW 268