Pairwise Alignments

Query, 359 a.a., DNA polymerase IV (RefSeq) from Shewanella loihica PV-4

Subject, 422 a.a., DNA polymerase IV from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  195 bits (495), Expect = 2e-54
 Identities = 123/348 (35%), Positives = 193/348 (55%), Gaps = 9/348 (2%)

Query: 4   IIHVDMDCFFAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARKFGVRSAMASAYAL 63
           I H+D D F+A+VE RD PELR KP+ VGG   +RGV+ST  Y AR++GV SAM    AL
Sbjct: 44  IAHMDCDAFYASVEKRDRPELRDKPVIVGG--GKRGVVSTACYVARQYGVGSAMPMFKAL 101

Query: 64  KLCPDLILVPGRMSVYKEVSAQIREVFARYTELIEPLSLDEAYLDVSDCTQ-HQGSATLI 122
           K CP+ +++    + Y   S +I     + T LI+PLSLDEA++D+S   + + G   L 
Sbjct: 102 KACPEAVVIRPDFTKYVFESQRILGALGQLTPLIQPLSLDEAWVDLSGTERLNGGPPALQ 161

Query: 123 AEAIRREIFEVTGLTASAGIAPVKFLAKIASDLNKPNGQYVITPQMIPEFVKTLALIKIP 182
               +++I E TGLT S G+AP +FLAK+AS+++KP G  V+        +    +  +P
Sbjct: 162 LIRFQKQIEEETGLTVSIGLAPNRFLAKMASEMDKPRGFSVVGAANAQALLAPRPVTALP 221

Query: 183 GVGKVTAAKLETMGLITCADVQACSRQSLMERFGKFGGVLYDRAQGIDPRGISPHRERKS 242
           GVG V    L + G  T  D+     + L++R+G+ G  L+D A   D R ++P R+RK 
Sbjct: 222 GVGPVFGKALRSDGYSTIGDLARADVRDLVKRYGESGLRLHDLAHARDARAVNPERDRKG 281

Query: 243 VGVETTLAKDIYTYEQCQAVMPQLIQELSGRISRSAKSRRIHKQVVKLKFDDFKQTT--I 300
           +  ETT  +D+ + E  +A +  L ++L+ +  R   + R+   V+KL+  DFK  T  +
Sbjct: 282 MSAETTFNEDLTSAEALEAELWPLCEKLASKARRDGVASRV--LVLKLRRTDFKIVTRRV 339

Query: 301 EQRSDEVSVKLFYDLLKQALERRAGRGIRLLGVSVG--LESEAVGAGL 346
                  + +  +   +  L+   GR  RL+G+ +    ++E   AGL
Sbjct: 340 TLPDPVQTARALFAAGRDLLKPELGRPYRLIGIGMADVQDAEDAPAGL 387