Pairwise Alignments

Query, 637 a.a., chaperone protein DnaK (RefSeq) from Shewanella loihica PV-4

Subject, 422 a.a., heat-shock protein from Pseudomonas simiae WCS417

 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 99/431 (22%), Positives = 173/431 (40%), Gaps = 83/431 (19%)

Query: 6   GIDLGTTNSCVAVLDGDKARVIENAEGDRTTPSIIAYTGEE--VLVGQPAKRQAVTNPKN 63
           GID GT+NS V  +   +  +I   +   T PS++ +  EE   + G+ A  + + N + 
Sbjct: 11  GIDFGTSNSTVGWIRPGEETLIALEDDKITLPSVVFFNFEERRPVYGRLALHEYLENYEG 70

Query: 64  TFF-AIKRLIGRRFKDDEVQRDVDIMPFKIIAADNGDAWVEAHDKKMAPPQVSAEILKKM 122
               ++K L+G +    +       MPF                       + A  + ++
Sbjct: 71  RLMRSLKSLLGSKLIKHDTSVLGTAMPF---------------------TDLLALFIGQL 109

Query: 123 KKTAEDYLGEPVTEAVITVPAYFNDSQRQATK-------DAGRIAGLEVKRIINEPTAAA 175
           K  AE   G    E V+  P +F D    A +       D  R  G +      EP AAA
Sbjct: 110 KSRAEANAGREFEEVVLGRPVFFVDDDPMADQEAENTLVDVARKIGFKDISFQYEPIAAA 169

Query: 176 LAYGIDKKQGDNIVAVYDLGGGTFDISIIEID----SVDGEQTFEVLATNGDTHLGGEDF 231
             Y     Q + +V + D+GGGT D S++ +       D  Q+ ++LAT G  H+GG DF
Sbjct: 170 FDYE-STIQKEELVLIVDIGGGTSDFSLVRLSPDRRHNDNRQS-DILATGG-VHIGGTDF 226

Query: 232 DNRLI-------------------------------NYLADEFKKEQSLDLRN------D 254
           D +L                                + +   + ++  L L +      D
Sbjct: 227 DKQLSLNGMMPLFGYGSRMKSGAYMPTSHHMNLATWHTINSVYSQKSQLALGSMRYDIED 286

Query: 255 PLAMQRLKEAAEK-------AKIELSSTTQTEVNLPYITADATGPKHLVVKITRAKLESL 307
              + RL +  E+        ++E +    T  +  ++  D   P  L V+++RA  ES 
Sbjct: 287 TGGIDRLFKLIEQRAGHWLAMEVEETKIQLTHEDSRHVLLDRVEP-GLSVELSRALFESA 345

Query: 308 VEDLIQRSLEPLKVALADADLSVSDINEVILVGGQTRMPKVRAEVSAFFGKELRQDVNPD 367
           ++ L++R    +   L DA +SV+ ++ V   GG + +P +R  +SA        + N  
Sbjct: 346 IDGLLERVRNSVTQLLNDASVSVAQVDTVFFTGGSSGIPALRHSISAMLPNARHVEGNIF 405

Query: 368 EAVAIGAAVQA 378
            ++  G A++A
Sbjct: 406 GSIGSGLAIEA 416