Pairwise Alignments

Query, 637 a.a., chaperone protein DnaK (RefSeq) from Shewanella loihica PV-4

Subject, 633 a.a., DNAK Protein from Agrobacterium fabrum C58

 Score =  802 bits (2071), Expect = 0.0
 Identities = 415/640 (64%), Positives = 514/640 (80%), Gaps = 12/640 (1%)

Query: 1   MGKIIGIDLGTTNSCVAVLDGDKARVIENAEGDRTTPSIIAYTGE-EVLVGQPAKRQAVT 59
           M K+IGIDLGTTNSCVAV+DG   +VIENAEG RTTPS++A++ + E LVGQPAKRQAVT
Sbjct: 1   MAKVIGIDLGTTNSCVAVMDGKDTKVIENAEGARTTPSMVAFSDDGERLVGQPAKRQAVT 60

Query: 60  NPKNTFFAIKRLIGRRFKDDEVQRDVDIMPFKIIAADNGDAWVEAHDKKMAPPQVSAEIL 119
           NP NT FA+KRLIGRR++D  V++D  ++PF+I+  DNGDAWV+A DK  +P Q+SA IL
Sbjct: 61  NPTNTLFAVKRLIGRRYEDPTVEKDKALVPFEIVKGDNGDAWVKAQDKNYSPSQISAMIL 120

Query: 120 KKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYG 179
           +KMK+TAE YLGE V +AVITVPAYFND+QRQATKDAGRIAGL+V RIINEPTAAALAYG
Sbjct: 121 QKMKETAESYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALAYG 180

Query: 180 IDKKQGDNIVAVYDLGGGTFDISIIEIDSVDGEQTFEVLATNGDTHLGGEDFDNRLINYL 239
           +DKK+G  I AVYDLGGGTFDIS++EI    G+  FEV +TNGDT LGGEDFD RL+ YL
Sbjct: 181 LDKKEGKTI-AVYDLGGGTFDISVLEI----GDGVFEVKSTNGDTFLGGEDFDMRLVEYL 235

Query: 240 ADEFKKEQSLDLRNDPLAMQRLKEAAEKAKIELSSTTQTEVNLPYITADATGPKHLVVKI 299
           A EFKK+Q +DL+ND LA+QRLKEAAEKAKIELSS+ QTE+NLP+ITADA+GPKHL +K+
Sbjct: 236 AGEFKKDQGIDLKNDKLALQRLKEAAEKAKIELSSSQQTEINLPFITADASGPKHLTLKL 295

Query: 300 TRAKLESLVEDLIQRSLEPLKVALADADLSVSDINEVILVGGQTRMPKVRAEVSAFFGKE 359
           TRAK ESLV+DL+QR++ P K AL DA ++ ++I+EV+LVGG +RMPKV+  V   FGKE
Sbjct: 296 TRAKFESLVDDLVQRTVAPCKAALKDAGVTAAEIDEVVLVGGMSRMPKVQEVVKQLFGKE 355

Query: 360 LRQDVNPDEAVAIGAAVQAGVLAGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPT 419
             + VNPDE VA+GAA+QAGVL GDVKDVLLLDVTPLSLGIET+G V T+LI++NTTIPT
Sbjct: 356 PHKGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPT 415

Query: 420 KASQTFSTADDNQSAVTIHVLQGERKQSSANKSLGQFNLEGIEPAPRGMPQIEVAFDIDA 479
           K SQTFSTA+DNQSAVTI V QGER+ +  NK LGQF+L G+ P+PRG+PQIEV FDIDA
Sbjct: 416 KKSQTFSTAEDNQSAVTIRVSQGEREMAQDNKLLGQFDLVGLPPSPRGVPQIEVTFDIDA 475

Query: 480 DGILHVSATDKKTGKAQNITIKASSGLSDEEVEAMVRDAEAHADEDAKFEELVSARNQAD 539
           +GI+ VSA DK TGK Q I I+AS GLSD ++E MV+DAEA+A+ D K    V A+NQA+
Sbjct: 476 NGIVQVSAKDKGTGKEQQIRIQASGGLSDADIEKMVKDAEANAEADKKRRAGVEAKNQAE 535

Query: 540 GMVHATKKQIEEAGDALPSEDKEKIEAAMADVDTATKGNDKEA--IEKATQALMEASAKL 597
            ++H+T+K ++E GD +   D++ IE A+A + TA +  + +A  I+  TQ LME S   
Sbjct: 536 SLIHSTEKSVKEYGDKVSETDRKAIEDAIASLKTAVEAAEPDADDIQAKTQTLMEVS--- 592

Query: 598 MEIAQAKAQAGQGEQAQQSNEAPADDVVDAEFEEVKDDKK 637
           M++ QA  +A Q E    S E   DDVVDA++EE+KDDKK
Sbjct: 593 MKLGQAIYEAQQAEAGDASAEG-KDDVVDADYEEIKDDKK 631