Pairwise Alignments

Query, 677 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 693 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  375 bits (963), Expect = e-108
 Identities = 219/682 (32%), Positives = 365/682 (53%), Gaps = 19/682 (2%)

Query: 7   SLTWKQTTLVVFSALFFAVAIFIVEVALVGVSARQQLMVAQEELLDSIEQPAANAVWALD 66
           SL+ K   +V+ SAL   V +   ++       RQ +    + +LD    P+  AV++LD
Sbjct: 18  SLSVKLLRVVLLSALAVGVVLSCAQIIYDTYKTRQAVDSDAQRILDMFRDPSTQAVYSLD 77

Query: 67  DNLATQTLEGVLKVEHVGEAVIELDDGSMFVSMNNPFTDNPLVRKLSEKLFGDLKQISRT 126
             +  Q +EG+ + E V  A I   + +M    + P  D  + R L++ + G  +  +  
Sbjct: 78  REMGMQVMEGLFQDESVRMASIGHPNETMLAEKSRPLQDMSM-RWLTDLILGQERTYTTQ 136

Query: 127 LYRPSFFEGTEKQQIIGTLTIFYNTQELTDSLFSQLRFSFLATLARALLVTMALSIIFHR 186
           L     +      +  G L+I  +T              F++ + RA+ + + L +++H 
Sbjct: 137 LVGRGPYS-----EYYGDLSITLDTSSYGKDFLINAVIIFISGVLRAMAMGLVLYLVYHW 191

Query: 187 FLTKPIAQISEAIDKIDPELPDENLLPTSTAHQDDELGLVTSKFNQILIQFG-------Q 239
            LTKP+++I E + +I+P+ P ++ +P    H+ +ELGL  +  NQ+L           +
Sbjct: 192 LLTKPLSKIIEHLTQINPDRPSQHQIPLLKGHEKNELGLWVNTANQLLASIERNTHLRHE 251

Query: 240 TQSKLRRMATRDPLTGLPNRTLLLETIAVSIQRARVHKHQFTMLFIDLDRFKNVNDSLGH 299
            ++ L+RMA  D LTGLPNR  L + +   +      +H+  +L + LD FK +N+   +
Sbjct: 252 AENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAVLCVGLDDFKGINEQFSY 311

Query: 300 ALGDQFLARIARVLERVVGDRGTVARLGGDEFVILAEDARTPDQAADFVDKLLMQLNVPL 359
            +GDQ L  +A  L    G  G +ARLGGD+F ++  +   P +AA+    +L  L VP 
Sbjct: 312 QVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELAQSILDDLEVPF 371

Query: 360 QLNEHTIHPAASVGISIYPDDGLSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTERAAV 419
            L+   I   A++GI+++P+DG S E L++ A+  M  AKA   N++ F+   +      
Sbjct: 372 DLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQFYIASVDSEMRR 431

Query: 420 RLRTEASLHDALKNNEFLLHFQPKFNIKTGKVIACEALIRWKK-DGRLISPMSFIPVAEE 478
           R   E  L +AL  N+  L +QP+ + +  +V+  EAL+RW+  +  ++ P  FIP+AE+
Sbjct: 432 RRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMVPPDQFIPLAEQ 491

Query: 479 TGIIIPLGRWVIEEACRTLKHWRKRYNYAIPIAVNVASQQFADASLVPDIKQLALRYQID 538
            G II +G WV+++ACR L+ W  +    + +AVN+++ Q   + L   +  L   Y++ 
Sbjct: 492 NGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSELPRVVNNLLQAYRLP 551

Query: 539 PSLLEVEITETSLMNDIELAIHKLEQLKGAGFGIAVDDFGTGYSSLSYLRHLPITTMKID 598
           P  LE+E+TET LM DI  A   L  L+ +G  IA+DDFGTGYSSLSYL+ LP+  +KID
Sbjct: 552 PRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKID 611

Query: 599 RCFVTDL---PNESAIASTILMLGKQLNLHIVAEGIENEQQLNWLKQMDCEIGQGFYYSQ 655
           + FV DL    +++ I   I+ LGK L + ++AEG+E  +Q  ++    C  GQG++YS+
Sbjct: 612 KSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQGCHEGQGYHYSK 671

Query: 656 PLDISEFEN--RYIAPNNASIS 675
           PL   E  +  +    N  S+S
Sbjct: 672 PLSARELTHFLKQAQRNRVSVS 693