Pairwise Alignments

Query, 677 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  326 bits (835), Expect = 5e-93
 Identities = 172/435 (39%), Positives = 261/435 (60%), Gaps = 8/435 (1%)

Query: 240  TQSKLRRMATRDPLTGLPNRTLLLETIAVSIQRARVHKHQFTMLFIDLDRFKNVNDSLGH 299
            ++ ++ R+A  D LT LPNRTL  + +  ++Q+A   K    ++F+DLDRFK +NDSLGH
Sbjct: 833  SEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGH 892

Query: 300  ALGDQFLARIARVLERVVGDRGTVARLGGDEFVILAEDARTPDQAAD----FVDKLLMQL 355
            A GD+ L  +A  L   V D  TVAR+GGDEF +L +   T + A +      + +L  L
Sbjct: 893  AAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSL 952

Query: 356  NVPLQLNEHTIHPAASVGISIYPDDGLSAEDLIRHADIAMYSAKAAGSNQWAFFKQQMTE 415
              P  L        AS+GI++ P DG     L+++AD AMY AK  G N + F++ +M  
Sbjct: 953  VRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNA 1012

Query: 416  RAAVRLRTEASLHDALKNNEFLLHFQPKFNIKTGKVIACEALIRWKKDGR-LISPMSFIP 474
             A  RL  E+ L  A++ NEF+L++QP+F+    ++   EAL+RW+   R L+ P  FIP
Sbjct: 1013 SALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIP 1072

Query: 475  VAEETGIIIPLGRWVIEEACRTLKHWRKRYNYAIPIAVNVASQQFADASLVPDIKQLALR 534
            V EE G+++ +G WV+ EA R LK W K       ++VN++++QF+D  L   I  +   
Sbjct: 1073 VIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEE 1132

Query: 535  YQIDPSLLEVEITETSLMNDIELAIHKLEQLKGAGFGIAVDDFGTGYSSLSYLRHLPITT 594
              + P+ LE+E+TE+ LM ++  A+  L  LK  G  IAVDDFGTGYSSL+YL+  PI  
Sbjct: 1133 SGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDV 1192

Query: 595  MKIDRCFVTDLP---NESAIASTILMLGKQLNLHIVAEGIENEQQLNWLKQMDCEIGQGF 651
            +KIDR FV  LP    ++ IA  I+ +   LNL ++AEG+E  +QL +L++  C+  QG+
Sbjct: 1193 LKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGY 1252

Query: 652  YYSQPLDISEFENRY 666
             + +P+   +FE ++
Sbjct: 1253 LFGRPMPAHQFEAQF 1267