Pairwise Alignments

Query, 457 a.a., DNA repair protein RadA (RefSeq) from Shewanella loihica PV-4

Subject, 451 a.a., DNA repair protein RadA from Methylophilus sp. DMC18

 Score =  329 bits (844), Expect = 1e-94
 Identities = 185/436 (42%), Positives = 256/436 (58%), Gaps = 10/436 (2%)

Query: 1   MAKNKTAYVCSECGQDFPRWQGQCNACGEWNTISEVRLAPAKSSAGSVAGYAGAVGGGSK 60
           MAK KT Y C+ECG   P+WQGQC +C  WNT+ E    P  ++    A  A       +
Sbjct: 1   MAKAKTQYTCTECGATEPKWQGQCPSCHAWNTLVET--VPEAATTSRFASLAPTAQ--LQ 56

Query: 61  KLSEVEEFEAKKLLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQLMP 120
           KL++VE  +  +  TGI E DRVL GGL  G V +I GDPG GK+T+L   V  +SQ + 
Sbjct: 57  KLADVEAQDVSRQATGITEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQTVCNVSQSLK 116

Query: 121 SLYCTAEESLSQFKNRVNRLRLDCNEENLYLMAETNVEAIIAELEAKQVKFAVIDSIQAV 180
           + Y + EES  Q   R +RL LD ++ ++  +AE N+E I   L+  Q    VIDSIQ V
Sbjct: 117 AFYISGEESAQQIAMRAHRLGLDASQVDV--LAEINLEKISQVLQQHQPDVVVIDSIQTV 174

Query: 181 VTDLANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH 240
            ++    +PGS +QV+  +  LT+  KQ  ++M LV HV K    AGP+ L HIVD + +
Sbjct: 175 YSEALQSAPGSVAQVRECSAQLTRVAKQLGISMILVGHVTKEGSLAGPRVLEHIVDSVLY 234

Query: 241 LECN-DGQVRTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSTTESPGAAITC 299
            E + +   R +RA KNRFG V+ +G+F MTE+G+  V NPS +FLS   +  PG+ IT 
Sbjct: 235 FEGDQNSSFRLIRAFKNRFGAVNELGVFAMTEKGLREVSNPSALFLSHHESPVPGSCITV 294

Query: 300 IRKGNRNLLLEIQCLTTEAEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIY-HDTYFNL 358
            ++G R LL+EIQ L   A    P+R+CVGL  NR+ ML  +L +H     Y  D + N 
Sbjct: 295 TQEGTRPLLVEIQALVDTAHAPNPKRLCVGLEQNRLAMLLAVLHRHAGVACYDQDVFINA 354

Query: 359 VGGLKIDESETCIDLALVAALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAV 418
           VGG+KI  SE  +DLA++ A++SSL    +P    + GE+ L G+VRP+  G  R+KEA 
Sbjct: 355 VGGVKI--SEPAVDLAVLLAIVSSLKNKPLPNKLIVFGEVGLAGEVRPVQRGQERLKEAA 412

Query: 419 QHGFTEIFIPFRNYHK 434
           + GFT   IP  N  K
Sbjct: 413 KLGFTHAIIPKANAPK 428