Pairwise Alignments

Query, 241 a.a., DNA-binding transcriptional regulator TorR (RefSeq) from Shewanella loihica PV-4

Subject, 246 a.a., Two-component transcriptional response regulator, OmpR family from Pseudomonas sp. S08-1

 Score =  173 bits (438), Expect = 3e-48
 Identities = 105/239 (43%), Positives = 144/239 (60%), Gaps = 13/239 (5%)

Query: 10  VLVVDDEAVIRARLKGYFEKEGYRVLEAADGEEMWQQFSQQHIDLVMLDINLPGVDGLSL 69
           +L+VDD+  IR  +  Y +K G RV  AADG +M        +DL++LDI +PG DGL L
Sbjct: 7   ILIVDDDREIRELVGNYLKKNGLRVSLAADGRQMRAFLEGNAVDLIVLDIMMPGDDGLKL 66

Query: 70  TRELR--SRSEVGIILVTGRDEAIDKIIGLEMGADDYVTKPFELRELLVRVKNLLWRISL 127
            RELR        I+++T R+E  D+I+GLEMGADDY+TKPF  RELL R+  +L R  +
Sbjct: 67  CRELRVGKHKATPILMLTARNEETDRIVGLEMGADDYLTKPFSARELLARINAVLRRTRM 126

Query: 128 VKKAQQQAIAELERCDDLIEFEDYSLALNSRRL-SQGEAVIKLTKAEFELLSAFVLHPQQ 186
           +    Q  I+E  R   LI F  + L  ++R L    + VI L+ AE+ LL  F+ HPQ+
Sbjct: 127 LPPNLQ--ISESSR---LIGFGQWRLDTSARHLLDAADTVIALSGAEYRLLRVFLDHPQR 181

Query: 187 VLSRERLMQLTSHRNQDVNDRTIDVIIRRLRNKL-----HAELFVTVHGEGYLFSAKVE 240
           VLSRE+L+ LT  R  DV DR+ID+++ RLR +L           TV  EGY+FS  V+
Sbjct: 182 VLSREQLLNLTQGREADVFDRSIDLLVSRLRQRLLDDAREPAYIKTVRSEGYVFSLPVQ 240