Pairwise Alignments

Query, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  360 bits (923), Expect = e-104
 Identities = 195/410 (47%), Positives = 270/410 (65%), Gaps = 3/410 (0%)

Query: 1   MLFSQLSLPAPLQQALEALAFSEATQIQAEAIPLVLSGVDLMASAQTGTGKTAAFALPIL 60
           M F+ L L  PL +ALE L +   T +QA+AIP VL+G DLMA+AQTGTGKTA FA+P+L
Sbjct: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60

Query: 61  AKLMGLAQAEGSDKQPRALVLVPTRELALQVHQGISDFARFTSLSAGLVYGGVSIEAQCQ 120
            +L+ +   + +    RAL+L PTRELA QVH  ++++A+   L+   VYGGVSI  Q  
Sbjct: 61  -QLLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMM 119

Query: 121 QLAAGVDLIVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELMALLPSE 180
           +L  GVD++VATPGRL+DL R+ A KL+ +  LV DEADRMLD+GF++E+A +  +LP +
Sbjct: 120 KLRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLPKK 179

Query: 181 RQTLLFSATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHLI 240
           RQTLLFSAT  D +  L+ + L  P  I VSP+N A+  V+Q V  VD +RK  L  HL+
Sbjct: 180 RQTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFVHLM 239

Query: 241 NKGDWQRVLVFSRKKVAADKLAARLCEQGIMAKAFHGDLGQGAREQVLADFRRGEIKVLV 300
            KG W++VLVF++ +   D L  +L   GI A   HGD  Q  R++ L  F+  E+++LV
Sbjct: 240 RKGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQILV 299

Query: 301 ATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRAGKQGVAVTLYCEEDALLLEEI 360
           ATDVAARG+DIE L  VVN++LP VA+DY+HRIGRTGRAG  G A++L C ++  +L  I
Sbjct: 300 ATDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLSAI 359

Query: 361 EALLDKRLPQQWLPGFEPD--LTKADPNPRRNGKAAQKRRAKRRGQGGRR 408
           E L  + L +     FEP+  +   D + +   K  + ++ K  G GG+R
Sbjct: 360 EMLTRQTLTRHMEQDFEPEHRVPDTDASGQVVKKPKKPKKPKSSGGGGKR 409