Pairwise Alignments

Query, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 451 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  335 bits (859), Expect = 2e-96
 Identities = 197/415 (47%), Positives = 260/415 (62%), Gaps = 11/415 (2%)

Query: 1   MLFSQLSLPAPLQQALEALAFSEATQIQAEAIPLVLSGVDLMASAQTGTGKTAAFALPIL 60
           M F  L L   L QA +A  +   TQ+QA+ IP  L+G DLMA AQTGTGKTAAF+  +L
Sbjct: 1   MNFDALPLDPLLAQAAKACGYETLTQVQAKVIPTALAGRDLMACAQTGTGKTAAFSFVLL 60

Query: 61  AKLMGLAQAEGSDKQPRALVLVPTRELALQVHQGISDFARFTSLSAGLVYGGVSIEAQCQ 120
            +L+   +A G   Q  AL+L PTRELA+QV   IS +++FT L+   VYGG +I  Q +
Sbjct: 61  QRLLNQPRAIG---QLSALILTPTRELAIQVADSISRYSQFTELTTLAVYGGANINPQRK 117

Query: 121 QLAAGVDLIVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELMALLPSE 180
            LA GVD++VATPGRL DL  +    L+ V QL+ DEADRMLDMGF  +I     LL   
Sbjct: 118 ALARGVDILVATPGRLFDLLGQHDLSLETVDQLIVDEADRMLDMGFVRDIERTKRLLCVS 177

Query: 181 RQTLLFSATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHLI 240
             T+LFSAT   +V AL+ + L  P+ I V+  +S  Q +EQ++Y +D+ RK  LL+ LI
Sbjct: 178 HSTMLFSATFTPEVKALATKMLDNPEWINVTSASSGPQ-IEQKIYPLDARRKAELLAELI 236

Query: 241 NKGDWQRVLVFSRKKVAADKLAARLCEQGIMAKAFHGDLGQGAREQVLADFRRGEIKVLV 300
            + +WQ+VLVF   K +A++L   L   GI    FHGD  QGAR + L  F+ GE++VLV
Sbjct: 237 GRNNWQQVLVFVNTKESAERLHRELKLDGIKNAVFHGDKTQGARNRALEQFKAGELRVLV 296

Query: 301 ATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRAGKQGVAVTLYCEEDALLLEEI 360
           ATDVAARG+DI +L  V+N ELP   QDYVHRIGRTGRAG  GV+++   ++D   L  I
Sbjct: 297 ATDVAARGLDITALPLVINLELPDEPQDYVHRIGRTGRAGLSGVSISFVAKQDETALGAI 356

Query: 361 EALLDKRLPQQWLPGFEP----DLTKADPNPRRNGKAAQKRRAKRR---GQGGRR 408
           EAL+ K LP++  PG+E          + + R   KAAQ +R K +    Q GRR
Sbjct: 357 EALIGKTLPREVQPGYEMGAPLPARYRELDTRVTSKAAQPKRGKGQKFGSQDGRR 411