Pairwise Alignments

Query, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 441 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  341 bits (874), Expect = 3e-98
 Identities = 195/408 (47%), Positives = 261/408 (63%), Gaps = 10/408 (2%)

Query: 3   FSQLSLPAPLQQALEALAFSEATQIQAEAIPLVLSGVDLMASAQTGTGKTAAFALPILAK 62
           FSQL+L   LQ  L  L + +AT IQA+AIP +L+G DL+A A+TG+GKTAAFALP+L K
Sbjct: 26  FSQLNLVKALQARLHHLGYQQATPIQAKAIPAILAGRDLLAGAKTGSGKTAAFALPLLQK 85

Query: 63  LMGLAQAEGSDKQPRALVLVPTRELALQVHQGISDFARFTSLSAGL--VYGGVSIEAQCQ 120
           L+G  Q  G      ALVLVPTRELA QV      +    +  A +  V+GGVS+ +Q  
Sbjct: 86  LVG--QRAGGGNHVGALVLVPTRELAQQVADSFISYGAELAPRAKVIAVFGGVSVNSQML 143

Query: 121 QLAAGVDLIVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELMALLPSE 180
            L  G D++VATPGRLLDL    A KL  +  LV DEADRML++GF +E+ E++  LP +
Sbjct: 144 ALRGGADILVATPGRLLDLLGSNAVKLSQLKALVLDEADRMLNLGFTEELGEILKQLPDQ 203

Query: 181 RQTLLFSATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHLI 240
           +QTLLFSAT  ++VL+L+ + L  P  + +  Q + S D+EQRVY V+   K ALL+ LI
Sbjct: 204 KQTLLFSATFPEEVLSLTAKLLTDP--VEIQMQEAQSADIEQRVYTVNRSNKTALLAELI 261

Query: 241 NKGDWQRVLVFSRKKVAADKLAARLCEQGIMAKAFHGDLGQGAREQVLADFRRGEIKVLV 300
               W++VLVF+  K + D LA +L ++GI A+ FHGD  QGAR +VL  F+ GEI VL+
Sbjct: 262 KVRQWRQVLVFASAKRSCDHLAQKLEKRGISAQVFHGDKAQGARSRVLDGFKNGEITVLI 321

Query: 301 ATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRAGKQGVAVTLYCEEDALLLEEI 360
           ATD+AARGIDI+ L  V+N+ELP    DY+HRIGR+GRAG+ G A++L   ++    + I
Sbjct: 322 ATDIAARGIDIDKLPVVINFELPRSPADYLHRIGRSGRAGETGEAISLISHDEYHHFKVI 381

Query: 361 EALLDKRLPQQWLPGFEPDLTKADPNPRRNGKAAQKRRAKRRGQGGRR 408
           E     RLP++  PGFE D       P R      K  AK  G G ++
Sbjct: 382 EKKNKLRLPREQYPGFEADAEAPLDCPSRQ----DKPMAKPEGTGKKK 425